Paenibacillus naphthalenovorans: IJ22_28640
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Entry
IJ22_28640 CDS
T04167
Name
(GenBank) ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pnp
Paenibacillus naphthalenovorans
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnp03019
]
IJ22_28640
03009 Ribosome biogenesis [BR:
pnp03009
]
IJ22_28640
Messenger RNA biogenesis [BR:
pnp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IJ22_28640
Ribosome biogenesis [BR:
pnp03009
]
Prokaryotic type
rRNA processing factors
IJ22_28640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
ALS23237
UniProt:
A0A0U2W6W5
LinkDB
All DBs
Position
complement(2813927..2815165)
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AA seq
412 aa
AA seq
DB search
MKRIWVNSDDEHTEVAVLESGKLMEYYKGKRNQGQLAGNIYIGLVVRVLQGMQSAFVDVG
LEKNGFLYIDDVLPAHMDRQPKEKPSIHDLVKEGQQIMVQVVKEPVGNKGAKVTTHYSIP
GRYGVYMPHADYIGVSRKIENPADRDRLKRIAERHLQPGEGFVVRTAALRESEEALAADL
IELRGRYRQLEEAAKLDAPAPRLLYSDLEMLPRLIRDLFRDDVQELIVTSERTLQEIRGL
IPAGSSGLAERVKLQSATDRSIGESVARQLENGLKRKVWLDNGGYLIIDRTEALTVFDVN
TGKYTGTIDLERTVFDTNMEAAREIARLLRLRDIGGLIIIDFIDMETDDYRQAVLEELIR
ETRKDRTKTVVVGWTRLGLVELTRKKVRDSMETTAPEPCSACGGSGFADFIK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggatatgggtcaatagcgatgatgagcataccgaggtcgccgttctggagagc
ggcaagctgatggaatattataaaggaaagcggaatcagggccagctggccggcaacatt
tatatcgggctggtcgtccgggtgctgcagggcatgcagtcggcctttgtcgatgtcggc
cttgagaagaacggattcctgtatatcgacgatgtattgccggcccatatggacaggcag
ccgaaggaaaagccgtccattcatgatttggtcaaggaaggacagcaaattatggtacaa
gtcgtcaaggaacctgtcggaaataaaggtgccaaggtgacgacgcactattccatcccg
ggccgttacggggtgtacatgccgcatgccgattatatcggcgtctcacgcaagattgag
aacccggcggacagggaccggctgaaacggatagcggagcggcatttacaacctggcgaa
ggctttgtcgtacggacggcggctctcagggaatcggaagaagcgcttgccgccgatctg
atcgagctgcgcggacgctaccgccagctggaggaagccgccaagctggacgcgccggcg
ccgcgtttgctatacagcgatttggagatgcttcccagactcattcgcgatttgttccgg
gacgatgttcaggagctcattgtgacctccgaacgaacgctgcaggaaattcgcggactg
attcccgctggttcttcagggcttgcggaaagagtgaagctgcagtcagcaacggatcgg
tccatcggggaatcggttgccaggcagctggagaacgggttgaaacgcaaggtatggctg
gataacggggggtatttgattatagaccggacagaagcgctgaccgtatttgatgtgaat
acggggaaatataccggaacgatcgatttggagcgcacggtgttcgatacgaacatggag
gcggcgcgggaaattgcccggctcctgcggctgagagatatcgggggactgatcatcatt
gattttatcgatatggaaacggacgattaccggcaagcggtgcttgaagagctcattcgg
gaaacgaggaaggaccgcaccaaaacggtggttgtcggctggactaggcttggtcttgtt
gaactgactcgcaaaaaggtccgcgacagcatggaaacgacagcgccggagccgtgttcg
gcttgcggcggcagcggctttgccgatttcataaaatag
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