Paenibacillus naphthalenovorans: IJ22_31460
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Entry
IJ22_31460 CDS
T04167
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
pnp
Paenibacillus naphthalenovorans
Pathway
pnp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
IJ22_31460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnp03400
]
IJ22_31460
DNA repair and recombination proteins [BR:
pnp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
IJ22_31460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
Spectrin_SESTD1
YajC
Motif
Other DBs
NCBI-ProteinID:
ALS23516
UniProt:
A0A0U2UK61
LinkDB
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Position
complement(3123932..3126310)
Genome browser
AA seq
792 aa
AA seq
DB search
MKTNSSYNQKILSTLDFHAVLQRCSQHASTSMGQERVLSLEPSGVFSEVKRRLQATDEAV
NVERLKGGAPFGGIRDIRAAVHRARIGGMLNPAELLDILLTSQGGRRLKKFLEALHEDYP
IPLLIELTEPMTDHKAIEDRIRACIDENANVADSATPELARIRQELRGSESKARERLEQM
IRTPSIQKMLQENLVTMRNDRYVIPVKQEYRGHFGGMIHDQSASGATLFIEPEVVVQMNN
RVRELKLKEEAEIEKILRMLSALVAEAADPLLVNVEALAELDFIFAKAGLAREMKATLPI
LNDRGFIKLKRGRHPLISPDSVVPIDVELGNRYSAIIVTGPNTGGKTVSLKTIGLLSLMA
MAGLFVPAEEGSQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIIRILKEMTPKSLVLLD
ELGAGTDPAEGSALAISILDYIHRMGCRIVATTHYSELKAYAFDRQGVINASMEFDVQTL
KPTYRLLVGVPGRSNAFAIAERLGLAKPIIDHARGQVGEEDQRVESMIATLEENRLKAEA
ERTTAEQLRLEVEALKEQLASERRRFEEQRDKLLERAELEAREAVAKARREADEVIKELR
RLQREEGSGVKDHKLSELKSRLNNAAPELKKASKAPKKKPEAIGPGDEVIVTSLGQRGHV
VDIVNAQEANVQLGILKMKVKQDDLQLVKKASSQTKTPPKATSSLKRTREDNAKMELDLR
GANVEEAIIEVDRFLDESYLANFGQVYIIHGKGTGVLRSGIQEFLRKHKHVKSFRMGAYN
EGGAGVTVAELK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaattcatcatacaatcaaaaaatattgtccaccctcgattttcacgccgtg
cttcagcgttgttcgcagcacgcttccacatctatggggcaggaacgcgtcctttcgctt
gagccgagcggtgtattttccgaggtgaaacgcaggctgcaggctaccgatgaagccgtg
aatgtggaacgccttaagggcggggctccatttggcggtatacgcgatattcgcgcagcg
gttcaccgcgcccggatcggcggtatgctgaatccggcggagctgttggatatcctgctg
acatcccagggcggcagacggctgaagaagtttctggaagccctgcatgaggattatccg
ataccgctgctgatcgaactgacggagccgatgaccgatcataaagcgatagaggaccgg
atccgggcgtgcatcgatgaaaatgcgaatgtggccgattccgctactcccgagcttgca
aggatacgtcaagagctgcgcggcagcgaatcgaaagcccgagagcgtcttgagcagatg
atacggacgccgtcgatccagaagatgctccaggaaaatctggtaacgatgcgtaacgac
cgctacgtcattccggtaaaacaggaataccgcggccacttcggcggaatgattcacgat
caatccgcatcgggagcaacgctatttatcgagcctgaagttgtggtacagatgaacaat
cgcgttcgggagctgaagcttaaggaagaagcggagattgagaaaattttgcgcatgctc
tccgcgcttgtcgcagaagcggctgatccgcttttggtgaatgtggaggcattggcggag
ctggatttcatctttgccaaagccgggcttgcccgtgagatgaaagcgacgctgccgatc
ttgaacgaccgcgggttcatcaagctgaagcgcggccggcatccgctgatttcaccggac
agcgtcgtaccgatcgatgtggagctgggcaaccgctattcggccatcatcgttacgggc
ccgaacacagggggcaagactgtctcgctcaagacgatcggccttctgtcgctcatggcc
atggccggattgttcgtgcccgccgaggagggcagccagctttgcgtctttgatgcgatt
tatgcggatatcggggatgagcaaagcatcgagcaaaacttaagtacgttctccagtcat
atgaccaatatcattcgcatcttgaaggaaatgacgcccaagagcctggtgttgcttgat
gagcttggagcgggtacggatccggccgaaggctcggcgcttgcgatatccattctggat
tatattcaccggatgggctgccgcatcgtagccacgacgcattacagcgagttaaaggca
tacgccttcgatcgccagggcgtcatcaatgccagcatggagttcgatgtccaaacgttg
aagccgacttaccggcttttggtgggtgtgccggggcgaagcaacgcttttgccatcgcc
gagcggctcggtctggccaagccgatcatcgatcatgcccgggggcaggtcggcgaggag
gatcagcgcgtcgagtcgatgattgcgacgctcgaagagaaccggctgaaggcggaggcg
gagcgtaccacggcggagcagcttcgcctcgaggtcgaagcgctcaaagagcagctggcg
agcgagcgacggcgcttcgaggagcagcgcgacaagctgctcgagcgggccgagcttgag
gcgcgcgaggcggtggctaaagcccggcgcgaggccgatgaggtcatcaaggagctgcgc
agactgcagcgggaagaaggaagcggcgtaaaggaccataagctgagcgagctcaagagc
cggctgaacaatgctgcgccggagctgaagaaggcgtccaaggctccgaagaaaaagccg
gaggcgatcggaccgggagacgaagtcatcgtcacaagccttggtcaaagagggcatgtg
gtggacatcgtgaacgctcaggaagcgaatgtgcagctgggtatcctcaaaatgaaggtg
aagcaggacgatctgcagcttgtgaaaaaggcttcctcacagacgaaaacgcctccgaag
gcaacttcaagcctgaagcggaccagggaggataacgcaaagatggagcttgatttgcgg
ggggcaaatgtcgaggaagcgatcattgaggtggaccggtttctggatgaatcctatctg
gccaatttcggacaagtgtatattattcacggtaagggaaccggcgttctgcggtcgggg
attcaggaatttttgcgcaagcacaagcatgtgaaaagcttccggatgggtgcgtataat
gaagggggcgccggggtgacggtcgcggagctgaaataa
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