Paenibacillus naphthalenovorans: IJ22_44660
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Entry
IJ22_44660 CDS
T04167
Name
(GenBank) subunit delta of DNA-directed RNA polymerase
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pnp
Paenibacillus naphthalenovorans
Pathway
pnp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IJ22_44660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnp03021
]
IJ22_44660
03400 DNA repair and recombination proteins [BR:
pnp03400
]
IJ22_44660
Transcription machinery [BR:
pnp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IJ22_44660
DNA repair and recombination proteins [BR:
pnp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IJ22_44660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
Motif
Other DBs
NCBI-ProteinID:
ALS24752
UniProt:
A0A0U2M8P8
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All DBs
Position
4458262..4458846
Genome browser
AA seq
194 aa
AA seq
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MSAQNLLKIGTEQAKEMPMVDLAFELLKAANTPFYYRDLMMEIAKIKGLSDDEVMQVIAQ
LYTEINIDGRFACVGTNLWGLKRWYPVEKSEDAVGSGKRPRIINDEDDDLDDEDLFAEEE
DTFAEEDYDSYDSPRDDYDSEDEVEEETEFFEEEEADEEVLDEVELDEEVSDLEDDLDDL
EEDFESADDDKNDK
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctcagaacctgcttaaaatcggtacggagcaagccaaggaaatgcctatggtg
gatctcgcctttgaattgctgaaggcggcgaatacgccgttttactatcgggatctgatg
atggaaatcgccaaaataaaaggtctgtccgatgacgaggtaatgcaggtcatcgcccag
ctatataccgagatcaacattgacggtcgttttgcatgtgtaggcaccaacctgtggggc
ctgaagcgttggtatcccgtggagaaatccgaggatgctgtgggcagcggcaaacgtccg
cgcatcattaacgatgaagacgatgacttggatgatgaggatttgttcgctgaagaagaa
gatacgtttgctgaagaagactatgacagctacgattctcctcgcgacgactacgactcg
gaggatgaggtggaggaagagaccgaattcttcgaagaagaggaggccgacgaagaagtc
ctggatgaagtggaactcgatgaggaagtttccgatctggaggatgacctcgacgatctg
gaagaagatttcgaaagtgcagacgacgataaaaatgacaaataa
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