Paenibacillus naphthalenovorans: IJ22_44920
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Entry
IJ22_44920 CDS
T04167
Name
(GenBank) ATPase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pnp
Paenibacillus naphthalenovorans
Pathway
pnp03030
DNA replication
pnp03430
Mismatch repair
pnp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IJ22_44920
03430 Mismatch repair
IJ22_44920
03440 Homologous recombination
IJ22_44920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnp03032
]
IJ22_44920
03400 DNA repair and recombination proteins [BR:
pnp03400
]
IJ22_44920
Enzymes [BR:
pnp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IJ22_44920
DNA replication proteins [BR:
pnp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IJ22_44920
DNA repair and recombination proteins [BR:
pnp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IJ22_44920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
AAA_30
AAA_5
AAA_22
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ALS24773
UniProt:
A0A0U2WBB3
LinkDB
All DBs
Position
4481950..4482927
Genome browser
AA seq
325 aa
AA seq
DB search
MSFQSIAGQERVKRILQNSLRTDKISHAYIFTGPSGTGRRAMAKAFAQAIYCKVLPDDAC
GECLDCRKVLHGNHPDLHEVKPEGASIKIEQIRELQKQFAYRASASGIKMYIIEEAEKMT
VQAANSLLKFLEEPASQVVAILITDNGQALLPTIRSRSQWIPFVPIGRSEMQKALLQEGH
PAVLVQAAVHMAAGTEAARGLIQGNGFAELRNLVIQLVRESLTRLPAALLTAQQKLTRGE
FSEQLPKFMDMLILWLKDMVQLSLGNKDGLIYSDQADWMSKQALSYPIEHWIYCLEQAVE
TQKRLRFHANPQLALENIFMKLKGV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcaatccatagcaggacaggaacgtgtaaaacgtattttacaaaacagtctt
cgaacggataaaatatcgcatgcctatattttcacggggccgtccggaacgggacgaagg
gcgatggccaaagcttttgcgcaagcaatttattgtaaggtgctgcccgatgatgcctgc
ggtgaatgcttggactgccgcaaggtactgcatggaaatcatcctgatttgcacgaggtg
aagccggagggggcctcaattaagattgagcaaatccgggagcttcaaaagcaattcgct
taccgtgcctcggcttccggaatcaagatgtatattattgaggaagccgaaaaaatgacg
gttcaggctgcgaacagcttgcttaaatttttggaagaacccgcatcccaggttgtggcc
attctgatcacggataacggacaagccctgcttccgacaatccgctccagatcacaatgg
attccctttgtgccaatcggccggagtgaaatgcaaaaggcgctgcttcaagaagggcac
ccggctgtcctggtgcaagccgctgtgcatatggcggcgggaacggaagcggctcgcggg
ttgattcaaggaaatgggtttgcagaacttcgaaatctagtgatacaattagtaagggaa
agtttgacccggctgcccgccgctctgctgaccgcacagcagaagctgacgaggggcgaa
ttttccgaacaactgccaaaatttatggatatgcttattttgtggctcaaggatatggta
cagcttagcttgggcaataaggacggactgatttattccgatcaggccgattggatgtcg
aagcaagctttgtcttacccgatcgagcattggatctactgtctcgagcaggcggtagag
acgcagaaacgattgcggtttcatgccaatccccagctggcgctggaaaatatatttatg
aagcttaagggggtgtag
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