Pandoraea norimbergensis: AT302_00820
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Entry
AT302_00820 CDS
T04226
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pnr
Pandoraea norimbergensis
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnr03032
]
AT302_00820
03400 DNA repair and recombination proteins [BR:
pnr03400
]
AT302_00820
Enzymes [BR:
pnr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AT302_00820
DNA replication proteins [BR:
pnr03032
]
Prokaryotic type
DNA Topoisomerases
AT302_00820
DNA repair and recombination proteins [BR:
pnr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AT302_00820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ALS58534
LinkDB
All DBs
Position
complement(4542899..4545520)
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AA seq
873 aa
AA seq
DB search
MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRALFAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDASVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEVRMAKIGHELLADIDKETVDFGPNYDGSEKEPLILPARIPNLLLNGSSGIAVGMAT
NIPPHNLNEVVEGCLYVLKNPDATIDELIEIIPAPDFPTAGIIYGISGVREGYRTGRGRV
VMRATTHFEDIDRGQRVAIIVDELPYQVNKRTLLERIAELVNEKRLEGISDIRDESDKSG
MRVVIELKRGEVPEVVLNNLYKHTQLQDTFGMNMVALVDGQPKLLNLREMLVHFLAHRRE
VITRRTVYELRRARERGHVLEGLAVALANIDDFIAIIKAAPTPPIAKAALMEKAWDSSVV
RDMLARAESETQGGRAAYRPEGLDAAVGMQLDGLYRLSETQAQEILQMRLQRLTGLEQDK
IVSEYKEVMAQIADLLDILARPERVTAIISEELTAVRAEFGDARRSTIEHNATELDTEDL
ITPQDMVVTLSHTGYIKSMPLSEYRAQKRGGRGKQAAATKDDDWIDTLFIANTHDTILCF
SNRGRVYWIKVWEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPVKQFTEDRFVFMATSLG
TVKKTPLAAFSRPLKKGIIAVNLDDGDVLIGAAITDGAHDVMLFSDSGKAVRFDENDVRP
MGREARGVRGMQLEDGQTVIALLVAENEQQSVLTATENGYGKRTSITEYTRHGRGTKGMI
AIQTSERNGRVVAATLVEPDDEIMLITTGGVLIRTRVSEIREMGRATQGVTLISLDEGTT
LSGLQRIVESDAEVAENGDAEGGDDAAEADATE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggatcagttcgccaaagaaactctcccgatttcactcgaagaagaaatgcgacggtcg
tacctcgattacgcgatgagcgtgatcgtcggccgtgcattgcccgatgtacgtgatggc
ctgaaaccggttcaccgccgggcgctgtttgccatgcacgagttgaataacgactggaac
cgggcatacaaaaaatcggcgcgtatcgtcggtgacgtcatcggtaagtaccacccgcac
ggtgacgcttctgtatacgacacgatcgttcgcatggcgcagccgttctcgctgcgttac
atgctggtcgatggtcagggcaacttcggctcggtcgacggcgacaacgctgccgcaatg
cggtacacggaagtccgtatggccaagatcggccatgaactgctcgcggacatcgacaag
gaaaccgtcgacttcggtccgaactacgacggcagcgagaaggaaccgctgattctgccc
gcccgtatcccgaacttgctgctgaacggttcgtcgggtattgccgtcggtatggcgacg
aacatcccgccgcacaacctcaatgaggtggtcgaagggtgtctgtacgttctcaagaac
ccggacgccaccatcgatgaactcattgagatcatcccggctccggacttcccgacggca
ggcatcatctacggtatctccggcgtgcgtgagggctaccgcaccggtcgcggccgtgtc
gtgatgcgagcaacgactcacttcgaggatatcgaccgcggtcaacgcgtggcgatcatc
gtcgacgagctgccctatcaagttaacaagcgcacacttctcgagcgtatcgccgagctg
gtcaacgaaaagcgtctggaaggcatttccgacatccgcgacgagtccgacaagagcggc
atgcgcgtggtgatcgagctcaagcgcggcgaagtacctgaagtcgtgctgaacaatcta
tataagcacacgcagttgcaggacacgttcggcatgaacatggtggcgctggtcgacggc
cagcccaagctgctgaatctgcgtgaaatgctggtgcacttcctggcgcaccgccgcgaa
gtgattactcgccgtacggtctacgaactgcgtcgtgcgcgtgaacgtggccatgtactc
gagggtctggcagtagcactcgctaacatcgacgacttcatcgcgatcatcaaagcggcc
ccgacgccgccgatcgcgaaggccgcgttgatggaaaaggcgtgggattcgtcggtggtg
cgcgacatgctcgcgcgtgccgagagcgaaacgcaaggcggccgtgcggcttatcgtccg
gaagggctcgacgccgccgtgggcatgcagctcgacggcctgtaccgtctgtcggaaacg
caggcgcaggaaatcttgcagatgcgtctgcaacgcctgacgggcctggaacaagacaag
atcgtttccgagtacaaggaagtgatggcgcagatcgccgacctgctggacattctggcc
cgcccggaacgtgtgacggcaatcatcagcgaagagctgaccgccgtgcgtgccgagttc
ggcgatgcccgccgctcgaccatcgaacacaacgccacggaactggataccgaagatctg
atcacaccgcaggacatggtggttaccctgtcgcatacgggttacatcaagtcgatgccg
ctgtccgaataccgtgcgcagaagcgcggcggccgaggcaagcaggcggcggcgaccaag
gacgacgactggatcgatacgctgttcatcgcgaacacgcacgatacgatcctgtgcttc
tcgaaccgcggccgggtttactggatcaaggtctgggaagtgccgcaaggttcgcggaac
tcgcgtggccgtccgatcgtcaatatgttcccgttgcaggatggcgagaagatcaacgtg
gtgctgccggtcaagcagttcacggaagatcgcttcgtgttcatggcaacgagcttgggc
acggtcaagaagacgccgctggcggccttcagccgaccgctcaagaagggcatcattgcc
gtgaatctcgatgacggcgacgtgctgatcggcgctgccattaccgatggtgcgcacgac
gtgatgctgttctccgattcgggcaaggctgtgcgtttcgacgagaacgacgtgcgtccg
atgggccgtgaggctcgcggcgtgcgcggtatgcagcttgaggacggtcagacagtcatc
gcactgctggtcgccgaaaacgagcagcagtcggtgctgacggcgaccgaaaacggctac
ggcaagcggacttcgatcaccgaatatacgcgccacggccgtggcactaagggtatgatt
gcgatccagacgagcgagcgcaacggccgggtggtcgcggcgacgctggttgagccggat
gacgagatcatgctgatcacgacgggcggggtgctgatccgtacgcgagtgtctgaaatt
cgcgaaatgggccgggccacgcaaggggtgacgctgatcagcctggacgagggcacgacg
ctttcgggtctgcaacgcatcgttgagtccgacgccgaagtcgcagagaacggcgacgcg
gaaggcggcgatgatgcggcggaagctgacgctaccgagtga
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