Pandoraea norimbergensis: AT302_01595
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Entry
AT302_01595 CDS
T04226
Name
(GenBank) pca operon transcription factor PcaQ
KO
K02623
LysR family transcriptional regulator, pca operon transcriptional activator
Organism
pnr
Pandoraea norimbergensis
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnr03000
]
AT302_01595
Transcription factors [BR:
pnr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AT302_01595
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
SBP_bac_11
MarR_2
P22_Cro
HTH_23
PBP_like_2
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ALS58670
UniProt:
A0A0U2XIN6
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Position
4723986..4724933
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AA seq
315 aa
AA seq
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MERHLLDGRIKLRHLQCLLAVAQHGSLQRAAEALSITQPAVSKTIAELEALLGVRLFDRG
RNGARPTAQAELFLRHAGASVSALRQGIDVLSRAVGQTGGVIEIAVLPTLAAAMMPAVLE
TFRREWPGIVVQVHTGANQQLLTQLKSGQVALALGRLSGPEGMTGLTFEHLYATPLCIVV
RPGHPLVKQRTVSIADIARYHVVLPPHGTILRHTADSFLRAHGVGALDDYSELLSMSLAR
AMTLRDDVVWIASEITVQDDLADGVLCALPFATKGTEESIGILWRNDTMPTPPEQTLISA
MREAARVRYGVPGLR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggaaagacacttactcgacgggcgtatcaagctgcgccatttgcaatgcctgctcgcg
gtcgcgcagcacggcagcctgcaacgggcggccgaagcgctgtccatcacccagccggcc
gtgagcaagaccattgccgagcttgaagcgctgctcggcgtgcgcctgttcgaccgtggc
cgtaacggcgcgcgcccgaccgcgcaagccgaactcttcctgcgccatgcgggtgccagc
gtcagcgcgctgcggcagggcatcgacgtcctctcacgcgctgtcggtcaaaccggcggc
gtgatcgagatcgccgtactgcccacgctggcggcggcgatgatgcccgccgtgctcgaa
accttccggcgggaatggcccggcatcgtcgtgcaagtccacaccggcgccaatcagcag
ttgctcacccagttgaaatcgggacaagtggcgctcgcgttggggcgtctgtccggtccg
gaaggcatgaccggcctcacgttcgaacatctctacgccaccccgctgtgcatcgtggtg
cgccccgggcatccactcgtgaagcagcgcaccgtgtcgattgcggatatcgcccgctac
cacgtcgtgctgccgccccacggcaccatcctgcgccataccgccgatagtttcttgcgc
gcgcatggcgtcggcgcgctggacgactattcggaactgctctccatgtcgctcgcccgc
gccatgacactgcgcgacgacgtggtctggatcgcctcggaaatcaccgtgcaggacgat
ctggccgacggcgtgctgtgcgccctgcccttcgccaccaagggcaccgaggagtccatc
ggcattctgtggcgcaacgacaccatgcccacaccgcccgaacagacgctcatcagcgcc
atgcgtgaagccgcgcgcgtgcgttatggcgtgcccgggcttcgttga
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