Pandoraea norimbergensis: AT302_02040
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Entry
AT302_02040 CDS
T04226
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
pnr
Pandoraea norimbergensis
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnr02000
]
AT302_02040
Transporters [BR:
pnr02000
]
Other transporters
Pores ion channels [TC:
1
]
AT302_02040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OmpA_membrane
Motif
Other DBs
NCBI-ProteinID:
ALS62971
UniProt:
A0ABM5WQV3
LinkDB
All DBs
Position
complement(4826929..4829079)
Genome browser
AA seq
716 aa
AA seq
DB search
MSPHTSTLYARLVAAGLCLAGLLPLAAQAQAKADAAATTVLAAAGSEATLPEVNVSAAQI
TSPTSLKRSASAGALGDHPEIETPFSIKSVSGEEIEDRQANILSEAVKYDASVTSISTSY
STHPATLAVRGLPLDDLNGYKIDGLASVNRGVEMPLEMFDRIEVLKGLTGFMYGFGSPGG
IVNYVTKRATEQFTLSYDQGWSEDGVWKEHLDTGGRFGKDDRFGFRFNAVHEEGNAAADS
AKINRTSVGLGLDARLTNDLTVTLDTMWQERRTSGGVDIITSPKYSVPDPISGRSKLYSN
GSYTDVTYKMATLGVQYKIAPEWVAKVAYRYSDSVRQYKKDQYYISSNKGDYSDRISAEY
HSYEFDEVQATVEGKFKTGPLTHEIVLGASNLVLLSNKSVNTPKVVVGNGNLYSPTIYSA
NNVNFSGGTYGDDKLTQRAIFASDRISYGSWSLLAGVRYQTYDEIAHASATAAATTYHAS
PVTPTVALMYTPRSDLTFYTSYVESLEQGGTADSTTKNANQQMAPIKSHQYEVGVKTDQG
RWRATAALFRVERGAEYVNSANYFVQDGKVRYQGVELGGSVDVLRSLTLDASVMGLNSEY
VNAAAGVNGKRAVGAPNWQAAFQATWRVPAVQGLYFQFGVRYLGGMAIDSGNVNYINPSA
LLDAGVGYRTRMYGKLVTLRANVTNLTDRRYWSYYQENYLQVGAPRTLSLNARIDF
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcctcatacttcgacgctgtacgcgcgcctcgtcgcggctggactctgtctcgca
ggcttgctgccgctcgccgcgcaagcgcaggcaaaagcagacgccgccgccactaccgtg
ttggcagcggccggcagtgaagccacgctgccggaagtgaatgtctccgccgcacagatc
acttcaccgacgagcctcaagcgcagcgccagcgccggtgcactcggcgatcatccggaa
attgaaacgccgttctcgatcaaatcggtgtccggtgaggagatcgaagaccgtcaggcc
aacatcctctcggaagcggtcaagtacgacgcatcggttacctcgatcagcacgagctac
agcacgcacccggccacactcgccgtgcgaggcctgccgctcgacgacctcaacggctac
aagatcgacggtctcgcgagcgtgaatcgcggcgtggaaatgccgctggaaatgttcgac
cgcatcgaagtgctcaagggcctgaccggcttcatgtatggctttggcagccctggcggt
atcgtcaactacgtgaccaagcgcgcaaccgagcagttcacgctgagctatgaccagggc
tggtcggaagacggtgtgtggaaggagcacctcgacacgggcgggcgcttcggcaaggac
gaccgcttcggtttccgcttcaacgcggtgcatgaggaaggcaatgccgccgccgacagc
gccaagatcaatcgcacgtcggtgggtctgggcctcgatgcgcgcctgaccaacgacctg
accgtcacgctcgacacaatgtggcaagagcgccgcacgtccggcggcgtcgacatcatc
accagcccgaagtactcggtgcccgatccgatttcgggccgctcgaagctgtacagcaac
ggctcctacactgacgtgacctacaagatggccacgctcggcgtgcagtacaagatcgcg
ccggaatgggtcgccaaggtggcctatcgctactcggattcggtgcgccagtacaagaag
gaccagtactacatctcgagcaacaagggcgactactcggaccgcatcagcgccgaatac
cacagctacgagttcgacgaagtgcaggcaacggtcgaaggcaagttcaagaccggaccg
ctcacgcacgaaatcgtcctcggtgcgagcaacctggtgttgctgtcgaacaagtcggtc
aacacgccgaaggtggtggtcggcaacggcaatctgtactcgccgacgatctactcggcc
aacaacgtgaatttcagcggcggcacgtatggtgacgacaagctgacgcaacgcgcgatc
ttcgcgagcgaccgtatctcgtacggctcgtggtcgttgctcgccggtgtgcgttaccag
acgtacgacgaaatcgcccacgcgtcggcgacagcggcggccaccacgtaccacgcctcg
ccggtcacgccgaccgtggcgttgatgtacacgccgcgcagcgatctcacgttctacacc
agctatgtcgaatcgctggagcagggcggcaccgccgacagcacgacgaaaaacgccaac
cagcagatggccccgatcaagagccatcagtacgaagtgggcgtgaagacggatcagggg
cgctggcgcgccacggcggcactgttccgcgtggagcgcggggcggagtacgtcaacagc
gcgaactacttcgtgcaagacggcaaggtgcgctatcagggcgttgaactgggtggctcg
gtcgacgtgctgcgcagcctgacgctcgatgccagcgtgatggggctgaattcggaatac
gtcaacgcggcggcgggcgtgaacggcaagcgcgccgtcggtgcgccgaactggcaggcc
gcctttcaggcaacgtggcgggtgccggccgtgcaaggcctgtacttccagttcggtgtt
cgctacctcggcggtatggccatcgactcgggcaacgtgaattacatcaacccgtcggca
ctgcttgacgccggtgtgggataccgcacgcgcatgtatggcaagctcgtgaccctgcgt
gccaacgtgacgaacctgaccgatcgccgctactggtcgtactaccaggaaaactacctc
caggtgggggcaccgcgtacgctcagcctgaacgcgcgtatcgacttctga
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