Pandoraea norimbergensis: AT302_03065
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Entry
AT302_03065 CDS
T04226
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pnr
Pandoraea norimbergensis
Pathway
pnr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT302_03065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnr03019
]
AT302_03065
Enzymes [BR:
pnr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AT302_03065
Messenger RNA biogenesis [BR:
pnr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AT302_03065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ALS58910
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All DBs
Position
5057108..5058667
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AA seq
519 aa
AA seq
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MIRKLIKKLLGKESGSPDAAYSATPAGTPVVIPVSVHGIDPTLLSKNAVRVTDTLQQAGF
KAFIVGGAVRDLLLGIAPKDFDVATSATPEQVQRLFRRARIIGRRFQIVHVQFGQEIIET
STFRALVDAIDSEQIGARRPKKGELDRKTHVTDESGRVLRDNVWGEQDEDAARRDFTVNA
MYYDPAAQTVHDYHHGWEDIQKRVLRMIGDPATRYREDPVRMLRVVRFAAKLGFKIDDAT
AAPIPELAPLIDNVPAARLFDEMLKLLLSGHAWGCVQQLREQGLHHGLLPLLDVVLEQPL
GEKFVTLALANTDARIRAGKPVSPGFLFAALLWHLVLEKWQAYQRAGEYPIPALHLAMDD
VLDAQTGKLAIQRRFVADMKEIWGLQVRLDKRVGRTPLRLLEHPRLRAGYDFLLLRCESG
EVPADVGQWWTDFLEGDSVTRDALLSQGAASGSTPAAKRRRRRRKPGSRGDGGNEGGDGG
EGGGNSGGANSGGDSGENATSEKNGKRVSSRQHGSEGAS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgatacgcaaactcatcaagaagctgctcggcaaagaaagcggctcccccgacgccgct
tacagtgccacccctgccggcacgccggtcgtcattcccgtgtcggtgcacggcatcgac
ccgacgctgctctcgaagaacgccgtgcgcgtgaccgacacgctgcaacaggccggtttc
aaggcgttcatcgtcggcggcgcggtccgtgacctgctgctgggcattgcaccgaaagac
ttcgacgtcgccacgagcgccacgcccgagcaagtgcagcgcctgttccggcgcgcacgc
atcatcggccggcgcttccagatcgtgcacgtgcagttcgggcaggagatcatcgagacc
tccacgttccgggcactggtcgacgcgatcgacagcgagcagatcggcgcacgccgtccc
aagaagggcgaactcgatcgcaagacccacgtgaccgatgagtcgggccgcgtgctgcgc
gacaacgtctggggcgagcaggatgaagacgcggcccgccgcgacttcaccgtcaacgcg
atgtattacgatccggccgcgcaaacggtgcatgactatcaccacggctgggaagatatt
cagaagcgcgtgctgcgcatgatcggcgacccggccacgcgctatcgcgaagaccccgtg
cgcatgctgcgcgtggtgcgctttgccgccaagctcggtttcaagatcgacgacgccacg
gccgcaccgattccggaactcgcgccgctcatcgacaacgtgcctgccgcgcgtctgttc
gacgaaatgctcaagctgctgctctcgggccacgcctggggttgcgtgcagcaactgcgc
gaacagggcctgcatcacggcctgctgccgctgctcgacgtggtgctggaacagccgctg
ggcgagaagttcgtgacgctcgcgctggccaacaccgatgcccgcattcgtgcgggcaaa
ccggtttcgccgggcttcctgttcgcggccctgctctggcacctcgtgctcgagaagtgg
caagcgtatcaacgcgccggcgaatatccgattcctgcgctgcacctcgcgatggacgac
gtgctcgatgcacagaccggcaagctggccatccagcgccgctttgtcgccgacatgaag
gaaatctggggcttgcaggtgcgtctggacaagcgcgtcggccgcacgccgctgcgcctg
ctcgaacacccgcgtctgcgcgccggttacgacttcctgttgctgcgctgcgaatcgggt
gaagtgcctgccgatgtgggccagtggtggaccgacttcctcgaaggcgactccgtcacg
cgcgacgcactgctctcgcagggtgcggcttcgggcagcacgccggccgccaagcgccgt
cgccgccgtcgcaagccgggctcgcgtggcgatggtggtaatgagggtggcgatggtggt
gaaggcggcggcaactcggggggggcaaactcgggcggcgatagtggtgagaacgctacc
agcgagaaaaatggcaagcgggtatcatcgcgacagcatggttccgaaggtgcttcatga
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