Pandoraea norimbergensis: AT302_03990
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Entry
AT302_03990 CDS
T04226
Name
(GenBank) hypothetical protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
pnr
Pandoraea norimbergensis
Pathway
pnr00540
Lipopolysaccharide biosynthesis
pnr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AT302_03990
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pnr01005
]
AT302_03990
Enzymes [BR:
pnr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
AT302_03990
Lipopolysaccharide biosynthesis proteins [BR:
pnr01005
]
Core region
AT302_03990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
DUF3180
Motif
Other DBs
NCBI-ProteinID:
ALS59048
LinkDB
All DBs
Position
5255934..5257235
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AA seq
433 aa
AA seq
DB search
MSKAHAPTRNPGRHLFATIVGILILLFPAAALVVPRGGNTVVFLIVACGAASLFAMRKCA
RGRPDIPAGPYFNVFVASLCLPIVAVVFVELLHRDVVANTLDSPARFLLAVLVFLGLRHI
ASIIPRWIDLTFGLGAISAAFMALYSTAETLAPRAESTFLNPIHFGDIALLLGVLSVVSI
HWLARDRFWLVVFKLIGGAAGCYASWASQSRGGWVALPVLLVIWLLCRPHSANLKRRAII
AGVAVVLVASTFLSSTVRDRFNNIHADLASLNAGQADTSIGIRLELWKTAVKLIRENPWT
GLGAHGYRNAMPAMAAAGDLTPMAADYGKGEVHNQILAYFADYGLLGLLAILGVYLGPAY
FFIRVGALQTRRREQRAALMGLMTAVAFAVFGLTVETFNLKVTVAFYATMLALLAALAYP
DSPRDTAVAAERS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggcccatgcgccgacccgcaatcccggtcggcatctgtttgccacgattgtc
ggcattctcatactgctgttccccgctgccgcgctcgtcgttccgcgtggcggtaatacc
gtggtgttcctcatcgtcgcctgtggtgcagcctcgcttttcgcgatgcgcaagtgcgcc
agggggcggcccgacatcccggcaggcccatacttcaacgtcttcgtcgcctcgctgtgt
ctgccgatcgtcgcggtcgttttcgtcgaattgctgcaccgcgacgtggtcgccaatacg
ctcgattccccggctcgttttctgctcgccgtgctggtctttctcggcctgcgccatatt
gcgtcgattattccccggtggatcgatctgaccttcggactgggcgccatctcggcagcc
ttcatggcgctgtattcgacggccgaaacgctcgcccctcgtgcggaaagcacgtttctc
aaccccattcacttcggcgatatcgcgctactgctcggcgtgctctcggtcgtgtcgatt
cattggcttgcccgtgaccggttctggctcgtcgtcttcaagctgatcgggggggccgcc
ggatgctacgcatcgtgggcgagtcagtcacgcggcggctgggtagcgttacccgttttg
cttgtcatctggctgctttgccgaccgcattcggccaacctgaagcgccgagccatcatt
gcaggggtagccgtcgtgttagtggcaagcaccttcctgtcgagcaccgtaagagaccgc
ttcaacaacattcacgccgatcttgcgagtctgaacgccggccaggccgatacgtcgatc
ggcatccggctcgaattgtggaagaccgccgtgaagctcatccgcgagaatccgtggacg
gggctcggggcgcacggttaccggaacgccatgccggcgatggcagcggcgggcgatctc
accccgatggcggccgattacggcaagggcgaggttcacaatcagatcctggcgtatttc
gccgattacgggttgctcggtttgctggctattctcggcgtctatctcggcccggcatac
tttttcattcgcgtcggggccctgcaaacacgcaggcgagaacaacgggcagcgctgatg
gggttgatgaccgccgtggcgttcgccgtctttggcctgactgtcgagaccttcaacctg
aaggtgaccgtggcgttctacgcaacgatgctggcgcttttggccgcgcttgcctatcct
gacagcccacgcgacaccgccgttgcggccgaacgttcctaa
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