Pandoraea norimbergensis: AT302_05860
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Entry
AT302_05860 CDS
T04226
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pnr
Pandoraea norimbergensis
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnr03000
]
AT302_05860
Transcription factors [BR:
pnr03000
]
Prokaryotic type
Helix-turn-helix
Other families
AT302_05860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
GAF
PAS_4
HTH_30
AAA_5
PAS_9
HTH_50
HTH_23
HTH_29
HTH_22
HTH_7
PAS_8
HTH_Tnp_1
HTH_28
HTH_1
HTH_20
HTH_17
Diguanyl_cycl_sensor
RWP-RK
HTH_psq
AAA_2
Motif
Other DBs
NCBI-ProteinID:
ALS59353
UniProt:
A0ABM5WGG1
LinkDB
All DBs
Position
complement(5679370..5681277)
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AA seq
635 aa
AA seq
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MPANTESAHARRVLNVVQGHLPAVAAATDPSIASSWRRCLDTHDLDPGARMAPHVIGSSQ
LTERRNAMEQLRHVSAHVLDRLQRQLMNPRQAVLLTDPEGVIVDCQLHDGTRDDFLRAGL
RPGADWSESCEGTNGIGTCVVERAPVIICQQDHFRALHTPLTCTASPVFAPHGELLAVID
VSSTSADVTRQSQFHTLALVNLSAKVVESEYFFLHYRDEWLLQLQEQADHLGGFAQALLA
FDDSGRVLAANQSALNRLGATRDDIIGTRVDQWFAQSLDALMARAHPQPQTCWPVRTHAG
EALLAMLRAPERAARPTPRIPAQPAPRQDTNVAPFTDAHLVREFSRACRVFAHDVPVLIR
GETGSGKEVFARAVHAASARANGPFVALNCAAIPEALIESELFGYVGGSFTGARKEGMSG
KLWQANGGTLFLDEIGDMPFAMQTRLLRVLEEREVLPLGGGEPVALDIRVLSATHQDLEA
RIVERQFREDLFYRLSGLAVVVPPVRERDDKLDLIQRLLKQAQADSSVVVTDAAREALCA
FDWPGNVRQMRSVIRTLVALSDDGVITPEDLPADVRQAQAVDGDTPREAPLEAAERQALR
ETLDACQGQVSAAARKLGVSRNTLYRKLKRFGLLR
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgaatacagaatcagcacacgcgcgccgtgtgctgaatgttgtacaaggtcac
ctgcctgccgtcgcggcagcgaccgacccgagtatcgccagctcctggcgccgctgtctc
gacacgcacgatctcgacccgggtgcgcgcatggcgccgcatgtcatcggatcgtcacaa
ctgaccgagcggcgcaacgcgatggagcaactgcgccacgtatcggcgcacgtgctggat
cgtctgcaacgccagttgatgaatccgcgacaggcggtgctactgaccgacccggaaggt
gtgatcgtcgactgtcagttgcacgacggcacgcgcgacgacttcctgcgtgccggcctg
cgtcccggcgcggactggagtgaatcctgcgagggcaccaacgggatcggcacatgcgtg
gtcgaacgggcgccggtgatcatctgccagcaggaccactttcgcgcgctgcatacgccg
ctcacctgcacggccagtccggtctttgcgccgcacggcgaattgctcgccgtgatcgac
gtgtcgtcgaccagtgccgacgtcacaaggcaaagccagttccacacactcgcgctcgtc
aatctcagtgcgaaggtggtcgagagcgaatacttctttctgcactatcgcgacgaatgg
ctgctgcaattgcaggagcaagccgaccatctgggcggtttcgcgcaggcgttgctggct
tttgacgacagcggccgcgtgctcgccgcgaatcagagcgccttgaatcgtctgggtgcc
acgcgcgacgacatcatcggcacgcgggttgaccagtggtttgcccaatcgctcgatgcg
ctgatggcgcgtgcgcacccgcaaccgcagacttgctggccggttcgcacgcatgcgggt
gaagcattgctggcgatgttgcgcgcccccgaacgggccgcgaggccaacgccacgcatt
ccggcgcaacctgcaccgcgtcaggacacaaacgtcgcgcccttcaccgacgcgcatctg
gtacgcgaattctcgcgtgcctgtcgtgttttcgcgcacgacgtaccggtgctgattcgc
ggcgaaaccggcagcgggaaagaagtcttcgcccgcgccgtgcatgcggccagtgcgcgc
gcgaacggcccgtttgtcgcgctgaactgtgcggccattcccgaagcgctgatcgagagt
gaattgttcggctacgtgggcggcagcttcacgggagcgcgcaaagagggcatgagcggc
aagctctggcaagccaacggcggcacgctgttcctcgacgaaatcggcgacatgccgttc
gcgatgcagacgcggctgttgcgcgtgctggaggagcgtgaggtgctgccgttaggcggc
ggagaaccggtggcgctcgatatccgcgtgctgagcgcgacgcatcaggatctggaggcg
cgcatcgttgagcggcaattccgggaagacctgttctatcgactcagtgggctggccgtc
gtggtgccgccggtgcgggagcgcgacgacaaactcgacctgatccagcggctgctgaaa
caggcacaggcagacagtagcgtcgtcgtgactgacgccgcgcgcgaagccctatgtgcc
ttcgactggcccggcaacgtgcggcagatgcgcagcgtgatccgtacgctggtggcgctg
agcgacgatggtgtcatcacgccagaggatctgcctgcggacgtgcggcaggcgcaggcc
gtcgatggagataccccccgcgaggccccgctcgaagcggcggagcggcaggcgttgcgc
gagacgctcgatgcctgtcaggggcaggtgagcgcggcggcgcgcaagctcggtgtgagc
cgcaacacgctgtaccggaagctgaagcggttcggcttattgcgctag
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