Pandoraea norimbergensis: AT302_06305
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Entry
AT302_06305 CDS
T04226
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pnr
Pandoraea norimbergensis
Pathway
pnr00300
Lysine biosynthesis
pnr00470
D-Amino acid metabolism
pnr01100
Metabolic pathways
pnr01110
Biosynthesis of secondary metabolites
pnr01120
Microbial metabolism in diverse environments
pnr01230
Biosynthesis of amino acids
Module
pnr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AT302_06305
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AT302_06305
Enzymes [BR:
pnr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AT302_06305
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ALS59423
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All DBs
Position
5779628..5780890
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AA seq
420 aa
AA seq
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MSNAFFSYRDDVLHAEGVALPVLAERFGTPLYVYSKAALTSAYQAYAKACEGRNAAVHYA
AKANSNLAVLGVFAKLGAGFDIVSAGELARVIAAGGDAGRVVFSGVGKHADEMRYALDKD
VFCFNVESRPELDRLNEVAAQMNKRARVSLRVNPNVDAKTHPYISTGLRGNKFGVAYEEA
FDAYRAAAAMSHLDVVGIDCHIGSQITEISPYLDAIDKLLDLVEKLDDAGISLHHIDVGG
GLGIQYTDETPPDITAFATTVIDHIAKRGHAHRQVLFEPGRSLVGNAGVLLTRVEFLKHG
ETKNFAIVDAAMNDLARPAMYEAYHGIDPVTRHAADVVTYDVVGPVCESGDWLGRDRALA
IAPDDLLAIRSAGAYGFTMSSNYNTRPRAAEVMVDGVDVHLVRERETVESLFAGERLLPA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgccttcttctcttaccgcgacgacgtactccatgccgagggcgtggccctg
cccgtactcgccgagcgtttcggtacgcctttgtacgtgtattcgaaggcggctctgacg
tccgcctatcaggcttacgccaaggcttgcgaagggcgtaacgcggcagttcattacgcg
gccaaggccaactcgaatctggccgtactcggcgtgttcgccaagctgggtgctgggttt
gacatcgtctcggccggtgaactggcacgcgtgattgccgccggcggtgacgccggccgc
gtggtcttctccggtgtgggcaagcacgccgacgaaatgcgttatgcgctcgacaaggac
gtgttctgcttcaacgtcgaatcgcgccccgagctcgaccgtctgaacgaagtggccgcc
cagatgaacaagcgcgcgcgcgtgtcgctgcgcgtgaatccgaacgtagacgccaagacg
cacccgtatatttctaccggcctgcgcggcaacaagttcggcgtggcttacgaagaagcg
ttcgacgcttaccgtgccgctgcggcaatgtcgcatctcgacgtggtcggcatcgattgc
cacatcggctcgcaaatcacggagatttcgccgtacctcgacgccatcgacaagctcctc
gatctggtcgaaaagctcgatgatgccgggatctcgctgcatcacatcgatgtgggcggc
ggcctcggcattcagtacacagatgaaacgccgccggacatcaccgcgtttgccaccacg
gtcatcgaccacattgccaagcgcggccatgcgcatcgtcaggtgctgttcgagccgggc
cgctcgctggtcggcaacgctggcgtactgctcacgcgcgtggaattcctcaagcacggt
gagaccaagaacttcgccatcgtcgacgcggccatgaacgatctcgcccgcccggccatg
tacgaggcttatcacggcatcgatccggtgacgcgtcatgcagccgacgtggtgacgtac
gacgtggtgggcccggtgtgcgaaagcggcgactggctcggccgtgaccgcgcgctggcc
attgcgccggacgatctgctggcgattcgctcggccggcgcgtacggcttcacgatgagc
tcgaactacaacacgcgtccgcgtgcggcagaagtcatggtcgatggcgtcgatgtccac
ctcgtgcgcgagcgcgaaacggtcgaatcgctgttcgccggtgaacgtctgctgccggcc
tga
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