KEGG   Pandoraea norimbergensis: AT302_06725
Entry
AT302_06725       CDS       T04226                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pnr  Pandoraea norimbergensis
Pathway
pnr02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pnr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AT302_06725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pnr03021]
    AT302_06725
Transcription machinery [BR:pnr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AT302_06725
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 HTH_23 HTH_24 HTH_IclR GerE HTH_29 HTH_7 HTH_11 TnsD Xre-like-HTH HTH_28 HTH_40 HTH_Tnp_ISL3 HTH_20 HTH_31 Terminase_5 HTH_38 HTH_10 HTH_3 HTH_Crp_2 HTH_AsnC-type HTH_17
Other DBs
NCBI-ProteinID: ALS59492
UniProt: A0A0U2XYQ4
LinkDB
Position
complement(5859015..5859527)
AA seq 170 aa
MPADDTLQRDALLGLYNDHHGWLHGWLHRKTGCSHRAADLAHDTFIRLLERDPPRMLASP
RAFLTTVAQRVLYNYWRREQIERAYLEALAQQPEAVAPSPEERAIVLETLLEIDRCLDGL
PPPVKRAFLLAQLDGLSHAEIAAELGISLATVKRYLVRAGTQCFFAMEAA
NT seq 513 nt   +upstreamnt  +downstreamnt
atgcccgccgacgacacgctgcaacgcgacgcgttgctgggactctataacgaccatcac
ggctggcttcacggctggctgcatcgcaagaccggttgctcgcatcgggcggccgatctt
gcgcacgacacgttcatccggctgctcgaacgcgacccgccacgcatgctcgcgtcgccg
cgcgctttcctgaccacggtggcgcagcgtgttctctataactactggcgtcgcgaacag
atcgagcgcgcgtatctcgaagcgctggcccagcagcccgaagccgtcgccccttcacca
gaagagcgcgccatcgtgctcgagacgctgcttgagatcgatcgctgtctcgacggtcta
cctcccccggtcaaacgcgcctttctgctggcccagctcgatggcctgtctcatgccgag
attgcggccgaactgggcatctcgctcgcgaccgtcaaacgctatctggtgcgtgccggt
acgcagtgcttcttcgcgatggaggcggcatga

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