Pandoraea norimbergensis: AT302_08235
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Entry
AT302_08235 CDS
T04226
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
pnr
Pandoraea norimbergensis
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnr03000
]
AT302_08235
Transcription factors [BR:
pnr03000
]
Prokaryotic type
Helix-turn-helix
Other families
AT302_08235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
PAS_8
AAA
PAS_4
Mg_chelatase
AAA_2
HTH_23
HTH_29
PAS_7
AAA_3
PAS_9
AAA_16
PAS
VapE-like_dom
HTH_28
ATPase
Xre-like-HTH
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ALS63137
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Position
complement(34430..36355)
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AA seq
641 aa
AA seq
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MALVSISRLQTLCETVAPRYTDRARFYSVREGYGAAVTALQSYVESGAVDVVLAAGSNGA
YLRENLSVPVVTVKVNGFDVLSAITRATTTWPDQPVGLVLHEAVSRELDDLGELLKIQLH
QRAYRSIDEVHHVVDTLAAEGCKVIIGPGMACDFAQEAGLEHVFLYSLGAVEEAFERSVE
LARVSREKESKRMRLNTIVAHMRDGVAAFDDNGQLEAVNPAMFALLGIEAERVATQGAQQ
FELSRKLGPMLRELSANGVAIEERLEHIDGRAFIVSCVPISEHGLRSGAVVTVQDAQMAQ
RIDRSLRTTQRPRHLVAKHELDELVGDSPLIAKVRRLARAGAAHDATVLLTGESGTGKEL
VAQGIHNASARRGNPFVAFNCAALPEGLIESELFGHDEGAFTGARRGGKAGLFEIAHTGT
IFLDEIGEMPAALQSRLLRVLQEREVMRLGSGRPVPIDVRVIAATHRNLHELVAQGRFRA
DLYFRLNLLQIELPALRERRADIALLAETLLARSAAQYGLNARATGQILAVLAPLFANYD
WPGNVRELENLLARAAIYLDHDLSEHAASLHEVFPELLRLNTAGAMHTPSPEHAEVVAPC
EAVTYEAAQAALQAAGGNRAAAARALGISRTTFWRLMKSPD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atcgccttggtgagcatcagccgcttgcagaccctgtgcgagaccgtcgcgccgcgctac
accgaccgtgcccgtttctactcggtgcgcgagggctacggcgccgccgtcacggccttg
cagtcgtatgtggaatcgggggcggtggacgtagtgctcgctgctggttcaaacggcgcc
tatctgcgcgagaacctgtcggtgccggtggtgacggtcaaggtcaacggtttcgacgtg
ctcagcgcgatcacccgcgccaccacgacgtggcccgatcagccggtgggtctcgtgctg
cacgaggccgtttcacgggagctggacgatctgggtgagttgctgaagattcaattgcac
cagcgcgcgtatcggtccattgacgaggtccaccacgtcgtcgacacgctggcggcggag
ggctgcaaggtcatcatcggcccgggcatggcctgcgacttcgcgcaggaggccgggctc
gagcacgtgtttctctactcgctcggcgccgtggaagaggctttcgagcgatcggtcgaa
ctcgcccgcgtgagccgcgagaaagagtcgaagcgcatgcgcctgaacaccatcgtggcg
cacatgcgcgatggcgtggccgccttcgacgacaacggccaactggaagccgtcaacccg
gcgatgttcgcgttgctgggcatcgaggcggaacgcgtcgcgacgcaaggcgcgcaacag
ttcgaactctcgcgcaagctcggaccgatgctgcgcgagttgtcggcgaatggtgttgcc
atcgaagaacgtctggaacatatcgacggtcgcgcgttcatcgtgagttgcgttccgatt
tcggaacacggtctgcgctcgggtgccgtggtcaccgtgcaggacgcgcagatggcgcag
cgcatcgaccggtcgctgcgaacgacgcaacgcccacgacatctcgtcgcgaaacacgaa
ctcgatgaactggtcggcgattcgccattgatcgccaaggtgcggcgtctcgcacgcgcg
ggcgcagcgcatgacgcgacggtgttgctgaccggcgagagcggcacgggcaaggaattg
gtcgcgcaaggtatccacaacgcgagcgcacggcgcggtaacccgttcgtggcgttcaac
tgtgcggcgctaccggaagggctgatcgaaagcgaattgttcggccacgacgaaggcgcc
ttcacgggcgcgcggcgtggcggcaaagcggggcttttcgagatcgcgcacaccggcacg
atctttctggacgaaatcggtgagatgcccgccgcgttgcagagccgcttgctgcgtgtg
ttgcaggaacgcgaagtcatgcggctgggctcaggccggccggtgcccatcgacgtgcgc
gtgatcgccgcaacgcaccgcaatctgcacgagcttgtcgcgcaggggcgttttcgcgcg
gacctctatttccgcttgaacctcttgcagatcgaattgcccgccctgcgagagcgccga
gcggatattgcgctgctcgccgaaacgttgctcgcgcgaagcgcggcgcaatacggattg
aatgcccgcgccaccgggcaaattctcgcggtgctggcgccactctttgcaaactatgac
tggccggggaatgtgcgcgagctagagaatttgctcgcacgcgcggcgatctatctcgat
cacgatctctcggaacacgcagcgtcgctgcacgaggtgttccccgaattgcttcgattg
aatacggctggcgcgatgcacacgccgtcgcccgaacatgcagaagtcgtggcaccgtgt
gaagccgtcacctacgaggcggcgcaagcggccttgcaggcggcggggggcaatcgtgcg
gccgcggcccgtgcactcggcatcagccgcacgacgttctggcgccttatgaagtcaccg
gactga
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