Pandoraea norimbergensis: AT302_08270
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Entry
AT302_08270 CDS
T04226
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
pnr
Pandoraea norimbergensis
Pathway
pnr02010
ABC transporters
pnr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AT302_08270
03070 Bacterial secretion system
AT302_08270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnr02000
]
AT302_08270
02044 Secretion system [BR:
pnr02044
]
AT302_08270
Transporters [BR:
pnr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AT302_08270
Secretion system [BR:
pnr02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
AT302_08270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_29
AAA_16
AAA_18
AAA_22
PaaX
AAA_21
P-loop_TraG
AAA_30
RsgA_GTPase
DUF87
Motif
Other DBs
NCBI-ProteinID:
ALS59747
UniProt:
A0ABM5WIK2
LinkDB
All DBs
Position
43599..45716
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AA seq
705 aa
AA seq
DB search
MAARDSAVESVVILLSFFRLPANAAQLHRELAGDHIDAAQLVRLLRRLGLKSQQVRVLPA
RLDKTPLPAIAVMRDGTFMLLGKIAEGLAVVQDSRSGQVHALPLAEFEAQSTGDLVLATR
RAAPLGAGGKFDIAWFLPAFMKYRRLIGEVLLISLFLQLFALISPLFFQVVMDKVLVHQS
MSTLKVLVIGLVTVSMFEVVMGGLRTYVFSHTANRIDVELGAKLFRHLLALPIAYFQSRR
TGETVARIRELDSIREFITSSALTLVMDLLFTVVFLAIMAFYSPWLTMIVLISLPCYALI
AVFVTPVLRARVEEKFRRGAESQSFLVESVSGIETLKSMSVQPQTQSRWETLLAAYVRAS
FRTANLGNIAGQMVQLVSKLCSATLLYLGAMKVIGGELTVGQLVAFNMFANHVTAPVLRL
SQLWNDFQQARISVDRLGDILNSPTEPGYNPGRAMMASIQGDVTFEGVAFRYRPDKPEVL
HGVTLAIRAGQTVGIVGPSGSGKSTLTKLVQRLYVPSAGRVVIDGVDLAMVDTHWLRTQI
GVVLQENLLFNRSVRENIAMADPAMPMERVIDAAKLAGAHEFILGMSHGYDTSIEERGVN
LSGGQRQRIAIARALVTNPRILILDEATSALDYESESIIQQNMRAICAGRTVLIIAHRLS
TVRSADRIITIESGAVVEDGTHDELVARGGRYARLCSIQAGEITS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccgtgacagtgctgtcgagagtgtcgtcattctgctgagcttcttccgtctg
ccggccaatgcggcgcaacttcaccgtgaattggcgggcgaccacatcgacgcggcgcaa
ctggtgcgattgctgcgacgcctgggcttaaagtcgcagcaggtacgcgttttgccggcg
cggctcgacaagacaccgttgcctgccattgccgtcatgcgcgacggaacgttcatgctg
ttgggcaagatcgccgaaggtctggcggtagtgcaggacagtcgcagcggtcaggtccac
gccctgccgcttgccgaattcgaggcacagagcacgggcgacctggtgctcgccacacgg
cgcgcagcgccactcggcgcgggcggtaagttcgacatcgcgtggttcttgccggcgttc
atgaagtacagacgactgatcggtgaagtgctgctgatctcgctgtttctgcaattgttc
gcgctgatctcgccgttgttctttcaggtggtgatggacaaggtactcgtgcaccagagc
atgagcacgctcaaggtgctagtgatcgggctggtgactgtctcgatgttcgaagtcgtg
atggggggcctgcgcacgtacgtgttctcgcacaccgccaatcgcatcgatgtggaactt
ggcgcgaagctgttcaggcacctgctggcattgccgattgcgtactttcagtcgcgtcgc
accggcgagacggttgcccgcatccgtgagctcgacagcattcgcgaattcatcacaagc
tctgcgctcacgctggtgatggatttgctgtttaccgtggtgtttctcgcgatcatggcg
ttctatagcccgtggctcacgatgatcgtgttgatctctctgccatgctacgcattgatc
gccgtgttcgtcacgcctgtcctgcgtgcgcgcgtcgaagagaaattccggcgcggcgcc
gagtcgcagtcgtttctggtggagtcggtcagtggcatcgaaacgctcaaatcgatgtcg
gtccagccgcagacgcagagccgttgggaaaccctgcttgcggcgtacgtgcgggcgagc
tttcgtacggccaatctcggcaatattgcgggtcagatggtgcaactggtctcgaagctg
tgcagcgccaccctgctgtatctcggtgccatgaaagtcattggcggtgagttgaccgtg
ggccaattggtggcgttcaacatgttcgccaatcacgtcactgcgcccgtgttgcgcctc
tcgcaactctggaacgacttccagcaggcgcgcatttcggtcgatcgtctgggcgacatt
ctgaacagtcccaccgagccggggtacaacccggggcgggccatgatggcgtcgattcag
ggtgacgtgactttcgagggcgtggcgtttcgctatcggcccgacaagcctgaagtgctg
catggcgtcacgctcgccattcgggctgggcagaccgtcggcatcgtcggcccttcgggt
tctggcaaaagcacactgaccaaactcgtgcagcgtctgtacgtgccctcggcggggcgc
gtggtgatcgacggcgttgatctcgcgatggtcgacacacactggctacgcacacaaatc
ggcgtggtgcttcaggagaacctgctgttcaaccgctccgtgcgcgagaacatcgccatg
gcagaccccgcgatgccaatggagcgggtgatcgacgcggcgaagctggccggcgctcat
gaattcattctcgggatgtcgcacggctatgacacatcgatcgaggaacgcggtgtgaat
ctgtcgggggggcagcggcaacgcatcgccatcgcccgtgcactcgtgaccaacccgcgc
atcctgattctcgacgaagccaccagcgcgctcgactacgagtcggagagcatcattcag
cagaacatgcgggccatctgtgccggccgtacggtgctgatcattgcgcaccggctgtcg
acggtgcgcagcgccgatcgcatcatcaccatcgagtcgggcgccgtggtcgaagacggc
acgcatgatgaactggttgcgcggggcggccgctatgcgcgcctgtgcagcattcaggcc
ggagagatcacgtcatga
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