Pandoraea norimbergensis: AT302_08435
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Entry
AT302_08435 CDS
T04226
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pnr
Pandoraea norimbergensis
Pathway
pnr03420
Nucleotide excision repair
pnr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AT302_08435
03430 Mismatch repair
AT302_08435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnr03400
]
AT302_08435
Enzymes [BR:
pnr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AT302_08435
DNA repair and recombination proteins [BR:
pnr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AT302_08435
MMR (mismatch excision repair)
Other MMR factors
AT302_08435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DUF5710
AAA_25
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ALS59777
UniProt:
A0A0U2Y7Y7
LinkDB
All DBs
Position
79028..81181
Genome browser
AA seq
717 aa
AA seq
DB search
MEDFVDTSRAPRFVPNGPAPTAEQVAIQLAKERVCLVQANAGAGKTSVLVARIGEAVARG
TSPGNILALTFTDTAASVLNRRLAQAGIHARAAEQVHVFTFDKFSRHVLSRLPGDDSRAT
QFELDRDLAPWIEEAMDNVPDETVEAFPEGTFEPNHVNVALAIDAMRRLKASGALFDDIY
DENLDGMLDALGVTRAQFIITIEYERIRRGRDDEPRFRDPYDATYDLAKAIGMDAIADAY
LGPYSLVVCDEQHDFNEAAYRVLCRVLLANQCRFLGVGDKDQVIHATLGASDTYMGDRFR
NDFTSTEHYPLSQTFRHGPHIAYPVAAFKQKTIESYVRSHTPIQLVESDGSPLGVANAVA
DEVAEWAAQAGSGDACAILLRDWHQSALIEEVLWRRNIRYRAPAARNFHHREEIRFVRGV
FAYALGAFGRLESSDRVAIAATLALFGNVQIEPGRVREMQALLAQNPELFEEFLKTWLVG
DVPERPVTKVGALVLEIRGLVKGLSAVDAFKLIRARIDFGAIARRVYAKPYDAEMVSRSL
DAFESAMAGKPDTLAGFFDTWLTTVTSATTGRRVERVIIDTVSNVKGREFDRVILPYMDR
NEFPNPHLAHDQEANLFYVAATRARNKLVLVTSSANAVLQSRFIGDLALETSTLRADIAL
DRNRQLASADNIIRIYLKHYDPRDHAEIRGLGASYDPARRQWYITSDMSTERFLPWL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttcgttgatacctcgcgcgcgccgcgcttcgtgccgaacggtccggcaccg
acagccgagcaggtggcgattcagttggccaaggaacgcgtttgcctcgtgcaggccaac
gccggcgcggggaaaacgtcggtgctggtggcgcgcattggtgaggcggtcgcgcggggc
acgtcgcccgggaacattctggcgctcacgtttaccgacacggccgcgtcggtgctgaat
cgccggctggcgcaggcaggcattcacgcgcgcgccgccgagcaggtgcacgtattcacg
ttcgacaaattcagcaggcacgtgctctcccgactgccgggcgacgactcgcgcgccacg
cagttcgaattggatcgggatctggcgccgtggatcgaagaggccatggacaacgtgccc
gacgagaccgtcgaggcgtttccggaaggcaccttcgagcccaatcacgtgaatgtggcg
ctcgctattgacgcgatgcgccgtctgaaagcgtccggtgccttgttcgacgatatctac
gacgagaatctggacgggatgctcgacgcgctgggtgtgacgcgtgcgcagttcatcatc
acgatcgaatacgaacggattcgacggggacgcgacgatgaaccgcgttttcgcgatccg
tacgacgcgacctacgatttggcgaaggcgatcggcatggatgccatcgccgatgcgtat
ctggggccgtacagtctggtcgtgtgcgacgagcagcacgacttcaacgaggcggcttac
cgggtgttgtgtcgcgtgttgctcgccaatcagtgccgttttctcggcgtcggcgataag
gatcaggtcatccacgccacgttgggtgcgagcgatacctacatgggcgaccgattccgc
aacgacttcacgtcgaccgaacactatccgctgagtcagacgttccgtcacggcccgcac
attgcctacccggtcgctgcgttcaagcaaaagacgatcgagtcgtacgtccgttcgcac
acgccgatccaactggtggaaagcgacggcagcccgctgggtgttgccaacgcagtggcg
gacgaggtggccgagtgggccgcgcaggcgggaagcggcgacgcgtgcgcgatcctgctg
cgcgactggcatcagtcggcattgatcgaagaagtactttggcgacgcaatatccgctat
cgggcgcccgccgcacgtaacttccatcatcgcgaagagattcgtttcgttcgtggtgtg
tttgcttatgccttgggcgccttcggcagactggaatcgtccgatcgcgtggcaattgcc
gcgacgttggcgctgttcgggaacgtgcaaatcgaacccggacgcgtgcgggaaatgcaa
gcgctgctggcgcagaacccggagttgttcgaggaattcctgaagacgtggctcgtgggc
gatgtgccggagcgtccggtgaccaaggtcggcgcactggtgctggaaattcgtgggctc
gtgaagggattgagcgccgtcgatgcgttcaagctgattcgcgcaaggatcgatttcggg
gccattgcgcgtcgcgtctacgcgaaaccctatgacgcggaaatggtgtcccggtcgctc
gacgcctttgaaagcgcgatggcggggaagccggatacgctcgcggggttcttcgatacg
tggctcacgacagtcacctccgcgacgaccggacggcgcgtcgagcgcgtgatcatcgat
acggtttccaacgtgaagggccgcgaattcgaccgcgtgattctgccgtacatggatcgc
aacgaattcccgaacccgcatctcgcgcacgatcaggaagccaatctgttctacgtggcc
gcgacgcgcgcgcgcaacaagctggtgctggtgacctcatctgccaatgccgtgcttcag
agccgattcatcggtgatctggcgttggagacatcgacgctgcgcgcggatattgcgctg
gaccggaaccggcaactggcatccgcagacaacatcattcgtatctatctgaagcactac
gatccgcgcgatcacgcggaaattcgagggctcggtgcgagctacgaccccgcgcggcgg
cagtggtacatcacgtcggatatgagcacggaacgcttcctgccgtggctctga
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