Pandoraea norimbergensis: AT302_09125
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Entry
AT302_09125 CDS
T04226
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pnr
Pandoraea norimbergensis
Pathway
pnr00300
Lysine biosynthesis
pnr00470
D-Amino acid metabolism
pnr01100
Metabolic pathways
pnr01110
Biosynthesis of secondary metabolites
pnr01120
Microbial metabolism in diverse environments
pnr01230
Biosynthesis of amino acids
Module
pnr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AT302_09125
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AT302_09125
Enzymes [BR:
pnr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AT302_09125
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ALS59892
UniProt:
A0ABM5WHV2
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All DBs
Position
253961..254812
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AA seq
283 aa
AA seq
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MKLKFTKMQGAGNDFVVIDGISQTIDFTPEQWRALADRHFGVGADQLLLVERSALPDVDF
RYRIFNADGGEVEHCGNGARCFVKFVRDTGLTDKRSVRVEVQQGVITLTAREDGQVSVDM
GAPILTPSDVPFDASGLEGRREGNDTLWPLDVAGKTTWISVVSMGNPHAVQVVDNVDTAP
VETDGPLVERHARFPRRVNAGFLQVVDKHQARLRVFERGAGETLACGTGACAAAVAGIRR
GLLASPVAIETHGGTLTIEWDGAAGPVIMTGPAATVFEGTIEI
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaattcaccaagatgcaaggtgccggtaacgacttcgtcgtgatcgacggc
atctcgcagaccatcgatttcacgcccgaacagtggcgtgcgctcgccgaccgccatttt
ggcgtcggcgcggaccagcttttgctcgtagaacgctcggcattgccggacgtggacttc
cgttaccgcatcttcaacgccgatggcggcgaggtcgagcattgcggcaacggcgcgcgc
tgcttcgtgaagttcgtgcgcgatacggggctgaccgacaagcgctcggtacgcgtcgaa
gtgcagcagggcgtgattacgctcaccgcgcgcgaagacgggcaggtcagcgtggatatg
ggcgcaccgattctgacgccatcggatgtgccgttcgacgcgagcgggctggaaggccgc
cgcgagggcaacgacacgctctggccgctggatgtggccggcaagaccacgtggatttcg
gtcgtgtcgatgggcaacccgcatgccgtgcaggtggtcgataacgtcgacacggcgccg
gtcgagaccgacggcccgctggtcgagcgccacgcgcgcttcccgcgccgcgtgaacgcc
ggttttctgcaagtggtcgacaagcatcaggcacgcctgcgcgtatttgagcgcggcgcg
ggcgagacactcgcctgcggcacgggcgcctgtgctgcggcggtggcgggcattcgccgg
ggcttgctcgcctcgccggtcgccatcgagacgcatggcggcaccctcaccatcgagtgg
gatggcgccgccggcccggtcatcatgacggggcccgccgcaacggtcttcgagggcacc
atcgagatctga
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