Pandoraea norimbergensis: AT302_09625
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Entry
AT302_09625 CDS
T04226
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pnr
Pandoraea norimbergensis
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnr01011
]
AT302_09625
Enzymes [BR:
pnr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AT302_09625
Peptidoglycan biosynthesis and degradation proteins [BR:
pnr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AT302_09625
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Motif
Other DBs
NCBI-ProteinID:
ALS59981
LinkDB
All DBs
Position
357249..359264
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AA seq
671 aa
AA seq
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MSERLSRVYRAAALALSAAALVACSTTQATGRPKAQPAASRSAPSATSADALSQRSPDDI
FTALREAARNNDAPRATALAAMLSDYDVPSYVQYFQIKPRMFDRSGKALLDTPDDDIRAF
LRTYDGQAIADRMRNDWLLVLGKRHDWQTFDAEYPKFALDDDTQVKCYALMSRAARGENV
TQAATDLLTSPKYYGEGCIDMINTLAANGQLPRKEVWHQIRLAYEENYTSLGKQIADALG
AVRPDDSLLDMAATRPTQILARGVDGSEQSRQLALLATVRMARSDAGLAASSFASVAGSL
SQDERAIGWGAIGMRGALSQNPMAISWYRQAGTAKLSNTAQEWKIRAALRAGDWNLVRTG
IEVMPASLRDDGVWTYWYGRALREAGQGDAARAQFQKIAMQPNFYGQLANEELGNKTQVP
PRTTVTQAEVDANRTNAGFQRAAKFYAMGLRFEGNREWNWELRNMTDRQLLAAAQYAKNI
ELFDRTVNTADRTKVEHDFTLRYLMPFRDVLERNAAAVDLDEAWAYGLIRQESRFIIDAR
SSAGAGGLMQIMPATAKMVAKKIGMDYEPGMMHDINVNIRLGTSYLSSIYNQFDGSAVLA
SAGYNAGPGRPRTWRSTLDRPVEGAIFAETIPFNETRAYVENVLSNTNYYSALITGRPQS
LKERLGVILPQ
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacgattgtcccgagtatatcgcgctgccgcgcttgccctgagcgccgctgcg
cttgttgcgtgcagcaccacgcaagcgaccggccgccccaaggcgcaaccggctgcgagc
cgctcggcaccttccgccacttcggccgacgcgctctcgcagcgctcgcccgacgacatc
ttcacagcgctgcgcgaggccgcccgcaacaacgatgcaccgcgcgccacggcgctcgcg
gcgatgctctccgactacgacgtgccgtcgtatgtccaatacttccagatcaagccgcgc
atgttcgatcgttcgggcaaggcgctgctcgataccccggacgacgatatccgcgccttc
ttgcgtacgtatgacggtcaggcgattgccgaccgcatgcgcaacgactggctgctggtg
ttgggcaaacgccatgactggcagacgttcgacgcggaatatccgaaattcgcgctcgac
gacgacacgcaggtcaagtgctatgcgctgatgtcgcgcgccgcccgtggcgagaacgtg
acgcaggcggcgactgatctgctgacctcgccgaagtactacggcgaaggttgcatcgac
atgatcaacacgctggcggcgaacgggcagttaccgcgcaaggaagtctggcatcagatt
cgtctggcctacgaggagaactacacctcgctcggcaagcagatcgccgacgcacttggc
gctgtgcgcccggacgacagcctgctggatatggcggctacccgtccgacacagatcctc
gcccgtggcgtggatggttccgagcaatcgcgtcaactcgccctgctggcgaccgtgcgc
atggcccgctccgatgccgggctcgccgcaagcagctttgcgagcgtggcgggcagcttg
tcgcaggatgagcgcgcgatcggttggggcgccatcggcatgcgtggtgcgctgtcgcag
aacccgatggcgatcagttggtatcgtcaggccgggacggccaaactctcgaacaccgca
caggaatggaagattcgcgcggcgttgcgcgccggtgactggaatctcgtgcgtacgggc
atcgaagtgatgccggcctcgctgcgcgacgatggcgtgtggacgtactggtacggccgt
gcgttgcgcgaagcggggcagggcgatgcggcgcgcgcgcagttccagaagatcgcgatg
cagccgaatttctacggccagttggcaaacgaagaactgggcaacaagacgcaggtgccg
ccgcgcaccaccgtgacgcaagccgaggtggatgccaaccgcacgaacgcgggcttccag
cgcgcggccaagttctatgcgatggggttgcgtttcgaaggcaatcgcgagtggaactgg
gaactgcgcaacatgacggatcggcaactgctcgccgccgcccagtacgccaagaacatt
gagctattcgatcgcacggtcaacaccgccgaccgtacgaaggtcgagcacgacttcacg
ctgcgctatctgatgccgttccgcgatgtactggagcgtaatgccgcggcagtcgatctg
gatgaggcatgggcctacggcctgatccgtcaggaatcgcgcttcatcatcgatgcgcgc
tcgtcggcgggcgccggtggtctgatgcagatcatgccggccacggcgaagatggtcgcc
aagaagatcggcatggactacgagccgggcatgatgcacgacatcaatgtcaacattcgt
ctgggcacaagctatctgtcgtcgatctacaaccagttcgacggctcggccgtgctggca
tcggccggctacaacgccggcccgggacgcccgcgcacgtggcgctccacgctcgatcgg
ccggtggaaggggcgatcttcgccgagacgatcccgttcaacgaaacgcgggcttacgtc
gagaatgtgctgtcgaacaccaattactactcggccctgattacggggcgcccgcaatcg
ctcaaggagcggctcggcgtaatcctgccccagtga
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