Pandoraea norimbergensis: AT302_12875
Help
Entry
AT302_12875 CDS
T04226
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pnr
Pandoraea norimbergensis
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnr03000
]
AT302_12875
Transcription factors [BR:
pnr03000
]
Prokaryotic type
Helix-turn-helix
Other families
AT302_12875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
TetR_N
HTH_3
HTH_24
HTH_31
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
ALS60534
LinkDB
All DBs
Position
complement(1071816..1072661)
Genome browser
AA seq
281 aa
AA seq
DB search
MLNRIEATLTQLRPSERKLATYVLDAPREVVDLSMNELAERANVSQPTIARFCQAVGCSG
YREFKIRLAQGIAQGVPFVHRDVRPDEPVPGIASKVLDRTIGSLMQVRNNLSPDSIGLAI
DLLANAKRIEFYGAGASGIAAQDMQHKFFRLGVPAVAYSDPHVYGMSAALLHEGDVVIAI
SNTGRTQDLLEAAQLARAAGASVIAITHSNSPLARLASVALFADVDEDTDVYSPLTSRIA
HLAIGDVLAVGMALRLGDRLPAQLARAKEVINRRRTASDGR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaccgaatcgaagccacactgactcaattgcgcccctcagagcgcaagctcgcc
acctatgtgctggacgccccgcgtgaagtggtcgatctgtcgatgaacgaactggccgag
cgtgccaacgtcagccagccgaccattgcccgtttttgccaggccgtcggatgcagcggg
tatcgcgaattcaagatccggctggcgcaaggcatcgcccaaggcgtgccgttcgtgcat
cgcgacgtgcgccccgacgagccggtgccgggcattgccagcaaggtgctcgaccgcacc
atcggcagtctcatgcaagtgcgcaacaacctgtcgcccgacagcatcgggctcgccatc
gacctgctcgccaatgccaagcgcatcgagttctatggcgcgggagcgtcggggattgcc
gcacaggacatgcagcacaagttcttccgattgggtgtgccggccgtggcatatagcgat
ccgcatgtgtacgggatgtcggccgccttgttgcatgagggcgatgtggtgatcgcgatt
tccaacaccgggcgcacgcaggatctgttggaagcggcgcagttggcgcgcgcggccggg
gccagcgtgattgccatcacgcacagcaattcgccgttggcgcgactggccagtgtggcg
ctcttcgccgatgtcgacgaagacaccgatgtgtactcaccgctgacctctcgaattgca
catctggccattggcgacgtgctcgccgttgggatggcactgcggctgggcgaccgtctg
cccgcacagctcgcccgcgcgaaggaagtcatcaaccgtcgccgcaccgcgagcgacggt
cgataa
DBGET
integrated database retrieval system
