KEGG   Pandoraea norimbergensis: AT302_12985
Entry
AT302_12985       CDS       T04226                                 
Name
(GenBank) EscD/YscD/HrpQ family type III secretion system inner membrane ring protein
  KO
K03220  type III secretion protein D
Organism
pnr  Pandoraea norimbergensis
Brite
KEGG Orthology (KO) [BR:pnr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pnr02044]
    AT302_12985
Secretion system [BR:pnr02044]
 Type III secretion system
  Type III secretion core apparatus
   AT302_12985
SSDB
Motif
Pfam: Yop-YscD_ppl_2nd Y4YQ_C RtxA
Other DBs
NCBI-ProteinID: ALS60556
LinkDB
Position
complement(1092966..1094348)
AA seq 460 aa
MTTTYTLTLLDGPLAGRSLPLPHGAFSLGTEDSDIAMALENGVGATLHVDDDGVHLLTRT
DVWVDGAPLGWTDDALPDVPLSIRLPLRSVVDLAGLGIWLDAGDAELPVPVPLPRRPARL
ASDAGQFSAQRQTHTQPSLAQDNPAFSWPLGRKPSKRPRRVTWFAATGVSLAALAVGAMI
WRTGAANVITSSGDIGTLKSLAGRIAPGISLTLSEGAVLFSGGCASEDVRSRLRTEARRL
DRVVRDDTWCPADLTQSVRTLLRLYGYGAAYVGVAPGGEIVISGAFVADARWRAASDALD
ALALPHGWRVDNDEADGFDTVVQLLKNADQLRGVNVTRERDGWRLTGPVSAQRQAALQSL
ADTWNDASRTLRLRIEPLPVRMPTLSQTGLPAPVVSIGGSPTAPHITLADGTRLMPGARL
AGGAHVIAVSADGVSIATHDRLFYLPLTPENTFDDTLDED
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgacgacgacgtacacactcaccttgcttgacggcccgcttgccgggcgctcgctgccc
ttgccgcacggtgcgttttcgcttggcacggaagactcggatatcgccatggcgctggag
aatggcgtcggggcaacgcttcacgtggacgacgacggggtgcacctgctcacccgcacc
gacgtctgggtcgacggtgcgccacttgggtggactgatgacgccttgccggacgttcct
ctctccatccggctgccgctacgctctgtcgtcgatctggcaggactcggcatttggctg
gatgccggcgacgccgaattgccggtgcctgtgccgttgccccgacgtccggcacgtctc
gcgtccgacgcgggtcagttttctgcgcagcgacaaacccatacgcagccgtcactggcg
caggacaatccggcattctcgtggcccttggggcgaaagccctcgaagcgcccgcgccgg
gtaacgtggttcgccgccacaggcgtatcgctggccgccctcgccgtcggcgccatgatc
tggcgaacgggcgcggccaacgtcattacctcatcgggtgacattggcacgctgaagtcg
cttgccggacgcatcgcccccggcatctcactgaccctctccgaaggggccgtcttgttc
tccggcggttgcgcctctgaggacgtccgttcgcgactgcgtaccgaagcgcggaggctg
gacagggtcgtacgcgacgacacatggtgccccgcagacctgacacagtccgtccgaacg
ttgttgcgtctttacggatacggcgcggcctatgtcggcgtcgccccgggtggcgagatc
gtgatcagcggcgcgttcgtcgcggacgcgcggtggcgtgccgcttccgatgcgctagat
gcactcgccctgccccatggctggcgcgtcgacaacgacgaagccgacggcttcgacacg
gtcgtgcaacttctgaaaaacgcggatcagctgcgcggtgtcaacgtcacacgcgagcgc
gacggctggcggctcaccggtccggtatccgcgcaacgtcaggcggcattgcagtccctc
gcagacacgtggaatgacgcttcacgcaccttgcgcctgcgcatcgaaccgttgccggtg
cggatgccgacgctttcacaaaccggtctgccggcaccggtggtgagcattggcggctca
cccactgcgccacacattacgttggccgacggcactcgcctcatgccgggcgcccggctg
gcagggggggcgcatgtcattgccgtctctgccgacggtgtgtcgattgccacacacgac
cggctcttctatttgccgctgacaccggagaacacctttgacgacacacttgacgaagat
tga

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