Pandoraea norimbergensis: AT302_15520
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Entry
AT302_15520 CDS
T04226
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pnr
Pandoraea norimbergensis
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnr01011
]
AT302_15520
Enzymes [BR:
pnr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AT302_15520
Peptidoglycan biosynthesis and degradation proteins [BR:
pnr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AT302_15520
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM1_NFP_LYK
DUF6491
Motif
Other DBs
NCBI-ProteinID:
ALS60962
UniProt:
A0ABM5WKB4
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Position
1647130..1648836
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AA seq
568 aa
AA seq
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MRLIVSLLLTLLLAACASTAPPTGASNSTPEAQSKSPLASNAKGKQRVSSDQTIDLDTDS
INDLAYGSDDADLWARIRHGFSIPDLDTDLAQDRTQWYAQRPEYVERMIQRSNKYLFHIV
EELERRHMPTELALLPFVESAYNPQALSTAKAAGMWQFIPSTGKTYNLKQNMFQDERRDV
LASTTAALDYLSKLYAMFGDWHLALAAYNWGEGNVQRAIDRNQAQGLPTDYLSLRMPTET
RYYVPKLQAIKNIIAHPELYSVKLPEIPNHPYFVSVTTKRDIDVALAAKLADLPLDEFRA
LNPSFRKPVILGAAQPQILLPFDSAEVFQKRLKGYDKPLSSWTTYTSASRERPEDVARKL
GVDAAVIRSVNNIAPRMRLKAGSTLLVPRSDDIDEDISASVATNAVLALEPDLPDTRKVM
VRARKHDTLAAVASRSGVSVAQIKGWNHLRRDALTGGQLLVLHVPVKDASRVMAASAAPA
APVAASASKDDDDAPRTRLVKGKNGKMIRVVDHRPAAKTTKTVASTAKAAPAKSAGKAPA
KAATKTVAKTAAKPVAKAPAKVTKTAQR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttatcgttagcttgcttctgacgctgcttctggcggcttgtgccagtacagcg
ccacctacaggtgcatcgaattccacgcccgaagcgcagagcaagtcgccgctcgcatcg
aatgccaagggaaagcaacgcgtgtcgagcgatcagacgatcgaccttgataccgactcg
atcaatgatctggcctacggcagcgacgatgccgacctctgggcccgcatccgccatggc
ttctccattcccgatctcgacaccgatctcgcgcaggaccgcacgcagtggtacgcgcag
cgccccgagtacgtggagcgcatgatccagcgttcgaacaagtatctgttccatatcgtt
gaagagcttgagcgccgtcatatgccgacggaactcgcgctgctgccgttcgtggaaagc
gcctacaacccgcaagcgctgtcgacggccaaggccgccggcatgtggcagttcatcccg
agcaccggcaagacgtacaacctgaagcagaacatgttccaggacgagcgccgcgacgtg
ctcgcctcgaccaccgccgcactggactacctgtcgaagctgtatgcgatgttcggcgac
tggcatctggcactggccgcgtacaactggggcgaaggcaatgtgcaacgcgccatcgac
cgcaatcaggcgcaagggctgccgaccgattatctgagcctgcgcatgccgaccgagacg
cgttactacgtgccgaagttgcaagcgatcaagaacatcattgcgcacccggagctctac
agcgtgaagctgccggagattccgaatcacccgtatttcgtgagcgtgaccaccaagcgt
gacatcgacgtggcgctggccgccaagctggccgatctgccgctcgatgaattccgcgca
ctcaacccgtcgttccgcaagccggtgattcttggtgctgcccagccgcagattctgctg
ccgttcgatagcgccgaagttttccaaaagcgcctgaagggctacgacaaaccgctgtcg
agctggacgacgtacacgtcggcatcgcgcgagcgcccggaagacgtggctcgcaagctc
ggcgtcgacgccgccgtgattcgctcggtgaacaacattgcgccgcgcatgcgtctgaaa
gcgggctccacgctgctggtgccgcgctcggatgacatcgacgaagacatcagcgcatcg
gtggcgaccaacgccgtgctggcgctggagccggatctgcccgacacccgcaaggtgatg
gtgcgtgcccgcaagcacgacacgctcgccgccgtcgcatcgcgcagcggtgtctccgtg
gcccagatcaagggctggaaccatctgcgccgcgacgcgctgaccggcgggcaactgctg
gtgctgcatgtgccggtgaaggatgcgtcgcgtgtgatggcggcgtcggcagcgcctgct
gcccctgtcgccgcgtcagccagcaaggatgatgacgacgcgccgcgcacgcgtctggtc
aagggcaagaacggcaagatgattcgtgtggtcgaccaccgtccggccgccaagacgacc
aagaccgtggcatcgaccgcgaaggctgcaccggccaagtcggctggcaaggcaccggca
aaggcggcgaccaagacggttgccaagacggcagctaagccggtcgccaaggcccctgcc
aaggtcacgaagaccgcacagcgctaa
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