Pandoraea norimbergensis: AT302_16170
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Entry
AT302_16170 CDS
T04226
Name
(GenBank) hypothetical protein
Organism
pnr
Pandoraea norimbergensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIG
Autotransporter
Big_9
Cadherin_5
VacA_C
NtrZ
Motif
Other DBs
NCBI-ProteinID:
ALS61076
UniProt:
A0ABM5WKQ4
LinkDB
All DBs
Position
1796411..1801660
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AA seq
1749 aa
AA seq
DB search
MLFTASSSAWSQACVTWTATSAQLSGGSYRYTLPLNDACDPTAEGLYTSPGQIVGTALAA
DGSSLSVDLGTFPYDILVFTPKLGTTQTSWTFTLYRASDAPVTVAINFPVPTVTSLSPSG
GPNSGGTAVTITGTGFTGATGVNFGATPGTGVVVLTDTTIVATSPAGTSPVDVTVTTSAG
TSAINAPNDRFTYTPTVTGVSPTSGPAGGGVSATITGTGFTNATSVTFGTNAALPYIIVS
DSTITVSNVPAGTGTVDVKVTNSAGTSATNASDRFTYLAAPVVTSVTPNAGAPGGGASVR
IQGSGFSTGGVPSVKFGSTPAPSFTLDNDAQITVTSPAAAAGTIDVTVTNNNGTSATSAA
DQFTYAGVPTVTSLGTKEGPLAGGTTVTINGTGLKTTTAVAFGAVSVPFTAVSDTQITVT
SPANASAGVVDIVVTTQGGTSATSSADQFTYMALPTVTSLAPTSGPAAGGTTVAISGSGF
TSTATVSFGGTAATNVQFVSASQLTARSPAGTGTVDVRVSTTGGTSATSMNDQFTYRAAP
AISGLSVTVGSPAGGTQTKITGTGFTGTTSVTFNGSPATTFNIDSDTQITVTSPAGSAGT
VNVVVTTPNGTSAVGPSSQFTYAAPPTVLSLGPTTGSTAGGDSVTITGSNFYNGVTTVKL
GGNTATITAISSTSITFTTPAGSPGLATLTVDTPGGTSTTGGAFTYVAVPVVTSLSPAYG
STSGSNPVTISGSGFTGATAVKFGATAAAFTVNSDSQISATAPAGTGVVDVRVTNPAGTS
AIVTADNYTYAGLPTVSSTVPAYGPVAGGTTVTITGTNFISGVTVVMFGAQLSNSVTVNS
STSLTATVPAGTAGAANILVTTPLGSKTVVGGYTYYAAPAVTSISPTSGPASGGTSVTIT
GTGFNNVTGVSFGGTSGTNITVNGTTQITATAPAGSGVVDVRVSAAGGTSPVTAADQFTY
LGAPAVTSVTPNTGPTTGGTPVTITGTGFTGATALKFGTVNGSSVTVLSATQITAVSPPG
TAGVTNITVTTPNGTSSTTPANQFTYTSPVAVTLAPTTLPTPVAGQAYSQTMTASGGTLP
YRFTVTNGTLPVGLTLNVTTGALTGTPSATGTSTFTISVTDASTGPGTPLTASQSYTFNI
TAQAASAPAIDVKALSNAPITIHATANAVGGPFTRVAIVTPPASGTAVVNGEDIVYTPAG
NTNGVVTFTYALTNAAGTSAPIGVTVTVQAVPVTAPGLQASVSANEATNIDITTGATGGP
FTAANVIAVSPANAGTATVVAVAGAAPVSAGGVQRLRAAVVAPTQYSVRFVPAAAFAGMA
VITYTLSNENATSAPGTLQVSVAPRKDPSTDPDVTGLIGAQVEAARRFATTQIGNFNQRL
EALHGKGRAPSSNGLNVVLPSPDRDRNVSRCQDVVGISERDACLRGDVSPLALNKAKSLD
VRDKSVGTSGVGTGDSSVPDLPGEGANDDKRFAYWTAGSVDFGFANMAANSAAQRSGFKF
TTGGVTLGADYRLSDQLSLGAGVGYGHDATDIGSSGTRSTGDSYSGALYASFRPIPTLFV
DAVAGFGTLNFSSRRWVIDANDFASGKRSGQQFFGSLSAGYEFRNDDWLFSPYGRLTASR
STLDQYSETGAGLNALTYFKQNVNTLSGTLGVRAGFAKATPIGTFSPYIRVELQHDFNGQ
SMAGLAYADIAGSGPVYFVPGSPFGSDRVQVGFGSKLRTGVLVFGLDYSVTTGMGGLQQG
VRLTFTAPF
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
gtgctgttcaccgcgtcgtcgtcggcgtggtcgcaggcatgcgtcacatggacggccacg
tcagcgcagctctccggcgggagctatcgctacacgttgccgctcaatgacgcatgcgat
cccacggcggaaggcttgtacacgtcgccggggcagatcgttggtactgcgcttgcggcg
gatggctcatcgttgtccgtcgatctcggcaccttcccgtacgacatcctggtcttcacg
ccgaaactcggcaccacgcagacctcgtggacgttcacgttgtaccgggccagcgacgcg
ccggtcacggtggccatcaatttccctgtgccaacggtcacctcgctttccccgagcggg
ggtccgaacagcggcggtacggccgtgacgatcaccgggaccggttttaccggggccacc
ggggttaacttcggtgcaacccccgggacaggtgttgtggtgctgaccgatacgacgatc
gtcgcgacatcccctgccggaacgtcacccgtcgacgtcaccgtcaccaccagcgctggc
accagcgccataaacgcgccaaacgacaggttcacatacacaccgacggtgacgggggtg
tcgccgacgtcagggcccgccggcggcggtgtgtcggcaacgatcacgggaaccggcttt
accaatgccacatcggtgaccttcgggacgaacgccgcgctgccctacatcatcgtgagc
gacagcacgatcacggtgtcgaacgtgcccgccgggacgggcactgtcgacgtgaaagtg
accaacagcgctggcaccagcgcgactaacgcgagcgatcggtttacctacctcgcggcg
cccgtcgtgacctcggtgacaccgaatgccggtgcgccaggcggcggagcgagcgtcagg
atccaaggttcggggttcagcaccggcggcgtgccgtcggtcaagttcggcagtacaccg
gcgccgagctttaccctcgacaacgatgcgcaaatcaccgtcacgtctcccgcggcggcg
gcgggcaccatcgacgttacggtcaccaacaacaatggcaccagcgcgaccagtgccgcc
gatcagttcacctacgcgggcgtccccaccgtgacatcgctcgggacgaaggaaggcccg
ctcgccggcggcacgacggtgacgatcaatgggactggcttaaagacaacgaccgcagtg
gcgttcggcgcggtcagtgtgcccttcacggctgtcagcgacacgcagatcacggtgaca
tcgcccgcgaacgcgagcgcaggcgtcgtcgacatcgttgtcaccacacaggggggcacc
agcgcgaccagcagcgccgatcagttcacgtacatggccctgcccacggtgacgagcctt
gcgccgacgtccggcccggcggccggaggtacgaccgtggctatcagcggcagtggcttc
acctccaccgcaaccgtgagtttcggtggaacggcggcgacgaacgtccagttcgtgagc
gcatcccagctaacggctcgctcacctgctggcacgggcaccgtcgacgtgagggtctcg
accaccggcggcaccagcgcgaccagcatgaacgaccagttcacgtatcgggcggcgccg
gcgatctccggcctctcggtgaccgttgggtccccggcgggcggcacgcagaccaagatc
acgggtaccggatttaccggcacaaccagtgtgacgttcaacggctcaccggcgacgact
ttcaatatcgacagcgacacgcagatcacggtgacatcgcctgccggctcggcgggaact
gtcaatgtcgtggtgaccacgccgaatggtacgagtgccgtcggtccgtcgagccaattt
acctacgcggcgccaccgacggttttgagtttggggcccactaccggctcaacggccggt
ggcgattcggtcacgatcacgggctcgaatttctacaacggggtcacgacagtcaagctc
ggtggtaacactgcaacaatcaccgcgatcagttcgacctcgatcacgttcacgacacct
gcgggctcgccaggtctggcaacgctcacggtcgatacgcccggcggaacctccacgaca
ggcggcgccttcacctatgtcgcggtgcctgtcgtgacttcgctttccccggcgtatggg
tcgacgagtggaagcaaccccgtgaccatctcgggcagcgggttcacgggcgcgacagcg
gtgaagttcggggcgacggccgcagccttcacggtcaatagcgattcgcaaatcagcgcg
acggcaccggcgggtaccggggtcgtggacgtgcgcgtgacgaacccagcgggcacgagc
gccatcgtgacggcggacaattacacctacgccggtttgccaacggtgtcatcgacggtg
cctgcctacgggccagtggccggtggcacgaccgtgaccatcaccggcacgaatttcatc
tccggcgtgacggtcgtgatgtttggtgctcaattgtcgaacagcgtgacggtcaacagc
tcgacgtcgctgacggccacagtaccggcgggcacggcaggcgctgccaacatcctcgtc
acgacgccgttgggcagcaagacggtggtcggcggctatacctactacgcggcacctgcc
gtcacgtcgatttcgccgacgagcggcccggcgagcggcgggacatccgtcacgattacg
gggacgggcttcaacaatgtgacgggcgtgtcgttcggtggcacgtcgggcacgaacatt
acggtcaacggcacgacacaaattacggcaacggcgccggcgggctcgggtgtcgtcgac
gtgcgcgtgagcgccgctggggggacgagccccgttacggcggcggatcagttcacttat
ctcggcgcgcctgcggtgaccagcgtcacccccaataccggcccaacgacggggggcacg
cccgtgaccatcacgggcacggggttcaccggtgccacggcgcttaagttcggtacagtc
aacgggtcctctgtcaccgtcctcagcgcaacgcagatcaccgcggtatcgccgccgggt
accgcaggcgtgaccaacatcacggtgacgacgccgaatggcacgagcagtaccacccct
gccaatcagttcacctacacgtcgcccgttgcggtcaccctggcgccgacgacattgccg
acgccggtggcggggcaagcctacagccagacgatgacggcgtcgggcggcaccttgccg
tacagatttaccgtgacgaacggcaccttgccggtgggtttgacgctaaatgtcacgacc
ggtgcgctcacaggtacgccgagcgccacggggaccagcacgttcacgatttcggtcacc
gatgccagcaccggaccgggcacgccgctgaccgcttcgcagagctataccttcaacatc
acggcgcaggctgcatcggcaccggcgatcgatgtgaaggcgctgtccaacgcgccgatc
acgattcacgcgacggcgaacgccgtaggcggcccgttcacccgcgtggccatcgtcaca
ccgcctgccagtggcacggcagtcgtcaacggtgaagacatcgtctacaccccggcgggc
aacacgaatggcgtggtcacgttcacctacgcgctcactaacgctgcgggtacttcggca
ccgattggcgtcacggtgacggtgcaggcggtgccggtgacggcgccggggttgcaagcg
agcgtgagtgccaacgaggcgaccaatatcgacatcacgacgggtgcgaccggtggcccg
ttcacggcggcaaacgtcattgcggtttcgcccgcgaatgcaggcacggccaccgtcgtg
gcggttgccggtgcggcgccggtgagtgcaggcggcgttcagcggcttcgcgctgctgtg
gttgcgcccacgcagtacagcgtgcgcttcgtgccggcggccgcctttgcgggcatggcc
gtgatcacgtacacgctgtccaacgagaacgccacgtcagcgccgggcacgttgcaggtg
agcgttgcgccacgtaaggatccgtcgacggacccggatgtgactggcctcatcggcgca
caggtggaagccgcacgccgcttcgccacgacacagatcggcaacttcaaccagcgtctc
gaagcgttgcacggcaaggggcgcgccccgtcgagcaacggcctgaatgtggtactgccg
tcgccggatcgcgatcgcaatgtgtcgcgctgtcaggatgtcgtgggtatctccgagcgc
gacgcgtgtctgcggggtgatgtgagtccgctggcgctcaacaaagcgaaaagcctcgac
gtacgcgacaagagcgtgggtaccagcggggtcggtacgggtgacagcagcgtgcccgat
ctgccgggcgagggtgccaacgacgacaagcgtttcgcgtactggacggctgggtcggtg
gacttcggtttcgccaatatggcggccaattcggccgcgcagcgctcgggcttcaagttc
acgacgggcggtgtcacgctcggtgccgactatcggttgtccgaccagttgtcgctcggg
gcgggtgtgggctacgggcatgacgcgaccgatatcggcagttcgggcacgcgcagcacg
ggcgatagctacagcggtgcgctgtatgcgagcttccgcccgatcccgacgttgttcgtc
gatgcggtggcgggcttcgggacgctgaacttcagttcgcgccgctgggtcatcgatgcg
aacgacttcgcgagcggcaagcgcagcggtcagcagttctttggttcgctgtcggcgggt
tacgagttccgcaacgatgactggctgttctcgccgtatggccgtctgacagcgtcgcgc
tccacgctggatcaatacagcgaaacgggtgctgggctgaacgcgctcacgtacttcaag
cagaacgtgaacacgttgtcgggcacgctcggtgtgcgtgccgggtttgccaaggcgacg
ccgatcggcaccttctcgccgtatatccgggtggagttgcagcacgacttcaacggacag
agcatggccgggctggcctatgccgacatcgcgggcagcgggccggtgtacttcgtgccg
ggcagcccgtttggcagcgatcgcgtgcaggtcgggttcgggtcgaagttgcgcaccggc
gtgctcgtcttcgggctggattacagcgtgacgacggggatgggcggcttgcagcagggc
gtgcgattgaccttcaccgcgccattttga
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