Pandoraea norimbergensis: AT302_16330
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Entry
AT302_16330 CDS
T04226
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
pnr
Pandoraea norimbergensis
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnr03000
]
AT302_16330
Transcription factors [BR:
pnr03000
]
Prokaryotic type
Helix-turn-helix
Other families
AT302_16330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
PAS_4
PAS
AAA_5
PAS_8
AAA
PAS_9
AAA_16
Mg_chelatase
AAA_2
AAA_7
DUF6262
AAA_22
TIP49
HTH_7
HTH_23
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ALS63334
LinkDB
All DBs
Position
complement(1838874..1840895)
Genome browser
AA seq
673 aa
AA seq
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MALPATAVRKPVIWAVGISKLGELYRDIVPDYAAQADVEIIDKGYEAVIEALERLPAGSV
DGIVAAGSNGAFLRERVALPVVLVKVTGFDVMHALARARRALPSTSPASRIALVSYARPA
PEFERFKHAFGLDISQHAYLDAHDADDLVHRLRDEGAEVIVGPGLVTELAERAGLTGVFL
YSQDSVRAAFDTALEVARFGRIEAQRRERLDTVLRHLREGVAAVDLNGRIEAMNASMAGM
LGVTVADVVGRPLDSIAPGLDISRTLESASAELEAIVTMAGKTWVVNRIPLLDQGTLTGA
LLTCQDSQAFARVDRSLRSRHRPRHLVARYRLDDLIGDSAAMTHVRALARRYAQTDSTVL
VHGESGTGKELLAQGIHNASRRRDYPFVAINCAAFPETLLESELFGYEDGAFSGARRGGK
AGLFETAHNGTIFLDEIGEMPMPLQTRLLRVLQEREVLRLGANEPIPCDVRVIAATHRDL
RQQVAAGVFREDLYYRLNILRMVLPPLRERMEDLPRLTPLFLERALARAGARMSVDALQA
SLLPLLAMYRWPGNVRELENLLERIAVVCADVVNAREISRARLIEIAPELGGAAQSETSR
DLQDVSKTNGGREIRANADQANTPAEAPLTGRERRAAAELERIHTTLAACGGDRMAACEA
LGISRSTLWRKLR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atcgcactgcctgccaccgccgtgcgcaagccggtgatctgggcggtcggcatcagcaag
ctcggtgagttgtatcgcgacatcgttcccgactacgcggcgcaggccgacgtggagatc
atcgacaagggttacgaggcggtcatcgaagcgctcgagcggctgcccgcaggcagtgtc
gacggtatcgtcgcagcaggctcgaacggcgcatttctgcgcgagcgcgtcgcgttgcct
gtggtgcttgtcaaagtgaccggcttcgacgtcatgcatgcactggcacgcgcacgccgc
gcgctgccgtcgacgtcgcccgcctcacgcatcgcccttgtgtcctatgcacgcccggcg
ccggaattcgagcgcttcaagcatgccttcggtctcgacatttcgcagcacgcctatctc
gatgcgcacgatgcggatgaccttgttcaccgtctgcgcgatgagggcgcggaagtcatc
gtcggccccggcctcgtgaccgaactggccgaacgcgcgggcctcactggtgtgtttctg
tattcgcaggactccgtgcgcgccgccttcgacaccgcgcttgaagtggctcgcttcggg
cgcatcgaagcgcagcgccgcgagcggctcgacaccgtgctgcgccaccttcgcgaaggc
gtcgcggcggtcgatctgaatggacgcatcgaagcgatgaatgcctcgatggcgggcatg
ctgggcgtaacggtcgccgacgtcgtcggccggccgctggactcgattgcgcctgggctc
gacatttcgcgcacgctggaaagcgcgagtgccgagctggaggccatcgtcacgatggcg
ggcaagacatgggtggtcaaccgcattcccctgctcgatcagggcacgctcacgggggca
ctcctcacttgtcaggattcacaggcgttcgcgcgggtggaccgttcgctgcgctcgcgg
catcggccacggcatctggtggcacgctaccggctcgatgatctgatcggcgactcggcg
gcgatgacacacgtgcgtgccctcgcacgccgctacgcgcaaaccgattcgaccgtgttg
gtgcatggcgagagcggcaccggcaaggagttgctggcgcaaggcattcataacgcgagc
cggcggcgtgactacccgttcgtcgcaatcaactgcgcggcatttccggaaacgttgctg
gaaagcgagttgttcggttacgaggacggcgcgttctccggcgcgcggcgcggcggcaag
gcggggctgttcgagaccgcccataacggcacgatctttctcgatgaaattggcgagatg
ccgatgccgttgcagacgcgtttgttgcgcgtgttgcaggagcgggaagtgctgcgcttg
ggcgccaacgaaccgattccgtgtgacgttcgggtcattgctgcgacgcaccgcgatttg
cgccagcaagtggcggccggtgtgtttcgcgaggacttgtattaccgccttaacattctg
cgcatggtgttgccgccgttgcgcgagcgcatggaagatttgccgcgcctcacaccactg
tttctcgaacgggcgcttgcgcgggcaggggcgcgcatgagcgtcgatgcgctgcaagcg
tcgctgctgccgctgctcgccatgtatcgctggccgggcaatgtgcgcgagttggagaat
ctgctggagcgtattgcggtggtgtgtgccgacgtcgtgaatgcgcgcgaaatcagccgt
gcgcgattgatcgagattgcgccggagttgggcggcgcagcgcagtccgagacttcgcgg
gatttgcaggatgtttcaaaaacgaacggcggccgggaaatacgtgcgaacgcagatcag
gcgaacacacctgccgaagcgccgctgaccggccgcgagcgccgcgccgccgctgaactt
gagcgcattcacacgacgcttgccgcctgcggtggtgaccgcatggcggcatgcgaagcg
ctcggcatcagccgttcgacgctgtggcgaaagctgcgttaa
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