Pandoraea norimbergensis: AT302_19035
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Entry
AT302_19035 CDS
T04226
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pnr
Pandoraea norimbergensis
Pathway
pnr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AT302_19035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnr03021
]
AT302_19035
Transcription machinery [BR:
pnr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AT302_19035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
PhyR_sigma-like
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_40
HTH_31
HTH_28
GerE
PCI
HTH_11
HTH_24
HTH_Tnp_4
TnsD
Motif
Other DBs
NCBI-ProteinID:
ALS61552
UniProt:
A0ABM5WLW1
LinkDB
All DBs
Position
complement(2488594..2489103)
Genome browser
AA seq
169 aa
AA seq
DB search
MESHFQREVSALYSDHHGWLRGWLRKKLGSTLDAADLAHDTYLRVLSSGRAPQPEDSRRY
LARIANCLVIDLFRRRDIEAAYLETLAALPEPVAPSPETRALVLEALIEIDTLLHRLPTK
ARTAFLLCKLEGLEYREIAERLQVSVSSVEKYIAHALRECYAVQYGSDA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtcattttcagcgcgaggtgagtgcgctctatagcgatcatcacggctggctg
cgtggctggttacgcaagaagctgggcagtacgctcgacgcggccgatctggcgcatgac
acctatctgcgcgtgctctcgagcggacgcgcgccgcaacccgaagactcccgccgctat
ctcgcccggatcgccaactgtctggtgatcgatctgtttcgccggcgtgatatcgaagcg
gcctatctggaaacgctggccgccctgccggaaccggtggcgccgtcacccgagacccgc
gcgctcgtgcttgaagccctcatcgaaatcgacaccctgctccatcgcctgccgacgaag
gcgcgcaccgcctttttgctatgcaagctcgaagggctcgaataccgcgagattgccgaa
cgattgcaggtctccgtctcctcagtcgagaagtacatcgcgcacgccctgcgcgaatgc
tacgccgtgcaatacgggagcgacgcatga
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