Pandoraea norimbergensis: AT302_20130
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Entry
AT302_20130 CDS
T04226
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pnr
Pandoraea norimbergensis
Pathway
pnr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT302_20130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnr03019
]
AT302_20130
03110 Chaperones and folding catalysts [BR:
pnr03110
]
AT302_20130
03029 Mitochondrial biogenesis [BR:
pnr03029
]
AT302_20130
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnr04147
]
AT302_20130
Enzymes [BR:
pnr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AT302_20130
Messenger RNA biogenesis [BR:
pnr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AT302_20130
Chaperones and folding catalysts [BR:
pnr03110
]
Heat shock proteins
HSP60 / Chaperonin
AT302_20130
Mitochondrial biogenesis [BR:
pnr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AT302_20130
Exosome [BR:
pnr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AT302_20130
Exosomal proteins of other body fluids (saliva and urine)
AT302_20130
Exosomal proteins of breast cancer cells
AT302_20130
Exosomal proteins of colorectal cancer cells
AT302_20130
Exosomal proteins of bladder cancer cells
AT302_20130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ALS61740
UniProt:
A0ABM5WML6
LinkDB
All DBs
Position
complement(2734926..2736563)
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKDIVLRDAARAKLVEGVNILADAVKVTLGPKGRNVVLERSFGAPVVTKDGVSVAKDI
ELADKLQNIGAQLVKEVASKTSDLAGDGTTTATVLAQAIVREGQKYVAAGLNPLDLKRGI
DRAVGVAVDALRAISKPTTTSKEIAQVATISANGEESIGQRIAEAIDRVGKEGVITVEDG
KTLADELDVVEGLQFDRGYLSPYFVNDPDKQIAALESPFVLLHDKKISNIRDLLPLLEQV
AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRRALLEDIAILTGGQV
IAEETGLSLEKATLAELGQAKRIEVGKENTTVIDGAGEAVNIQARVKQIRVQIEEASSDY
DREKLQERVAKLAGGVAVIKVGGATEIEVKEKKDRVDDALHATRAAVEEGIVPGGGVALI
RVRDKVREVRGDNADQDAGIKIVLRALEEPLRQIVANAGDEPSVVVAKVAQGSGNFGYNA
AIGEYGDLVELGVLDPTKVTRTALQNAASVAGLLLTTDATIVEAPKASAPALPGAGGAGG
ADFGF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagacatcgtattgcgcgacgccgcacgcgcgaagctcgtggaaggcgtg
aacattctcgccgacgccgtgaaggtcacgctcggtccgaagggacgcaacgtcgtgctc
gaacgcagtttcggcgcaccggtcgtcaccaaggacggcgtatccgtcgcgaaggacatc
gagcttgccgacaagcttcagaacatcggcgcgcagctcgtcaaggaagttgcgtcgaag
accagcgatctcgcgggcgacggcaccacgaccgccacggtactggcacaagccatcgtt
cgcgagggccagaaatacgtggccgccgggctcaacccgctggatctgaagcgcggtatc
gaccgtgcggtcggcgtggcggtcgacgccttgcgcgccatcagcaagcccacgacgacc
agcaaagaaatcgcgcaggtcgccacgatttcggccaacggcgaagagtcgatcggtcag
cgcatcgccgaagcgattgatcgcgtgggcaaggaaggtgtgatcacagtcgaagatggc
aagacgctcgctgacgaactggacgtggtcgaagggctccagtttgatcgcggttatctg
tcgccctacttcgtcaacgaccccgacaagcagattgctgcgctggaatcgccgttcgtg
ctactgcacgacaagaagatcagcaacattcgcgatctgctgccgctgctggagcaagtc
gccaaggccggccgtccgctgctcatcatcgcggaagacgtggaaggcgaagcactcgcc
acgctggtcgtgaacaacattcgcggcattctcaagacggttgccgtcaaggcgccgggc
ttcggtgaccgccgccgggcgttgctcgaagacatcgccatcctcacaggcggtcaggtg
atcgccgaggaaaccggcctgtcactggagaaggcaacgcttgccgagttgggacaagcc
aaacgtatcgaagtcggcaaagaaaacacgactgtcatcgacggcgccggtgaggccgtc
aacattcaggcgcgcgtcaaacagattcgcgtgcagattgaagaagcctcgtccgactac
gatcgcgaaaagttgcaggagcgcgtggccaagctggcgggtggcgtggccgtcatcaaa
gtgggcggtgctaccgaaatcgaggtcaaggagaagaaagatcgcgttgacgacgccctg
cacgccacgcgggcggcggtggaagaaggcattgtgccgggcggtggcgtggcgttgatt
cgcgtgcgcgacaaggtgcgggaagtgcgcggcgataacgccgatcaggacgcgggcatc
aaaattgtgctgcgtgcgctggaagagccgttgcgtcagatcgtcgctaacgcgggcgat
gagccgagcgtcgtcgtcgcgaaggtggcacaaggcagcggcaatttcggctacaacgcc
gcaattggcgaatacggcgatctggtggaactgggggtgctcgatccgaccaaggtcacg
cgcacggcgttgcagaacgcggcttccgtcgctggcttgctgctcaccaccgacgcgact
atcgtcgaagcgccgaaggcaagcgcaccggcgctacccggcgcaggcggcgcgggcggg
gctgatttcggtttctaa
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