Pandoraea norimbergensis: AT302_23840
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Entry
AT302_23840 CDS
T04226
Name
(GenBank) IclR family transcriptional regulator
KO
K21602
IclR family transcriptional regulator, regulator of plant utilization
Organism
pnr
Pandoraea norimbergensis
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnr03000
]
AT302_23840
Transcription factors [BR:
pnr03000
]
Prokaryotic type
Helix-turn-helix
IclR family
AT302_23840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HVO_A0261_N
HVO_A0114
Dimerisation
HTH_24
HTH_20
Sigma54_DBD
SMC_Nse1
DUF8612
WHD_DprA
Rrf2
Motif
Other DBs
NCBI-ProteinID:
ALS62369
UniProt:
A0ABN4JML4
LinkDB
All DBs
Position
3590911..3591738
Genome browser
AA seq
275 aa
AA seq
DB search
MKDDSSQGAESRTSIQVIERMMRLLDALAGHADPVSLKELAQSTELHPSTAHRILNDMVA
CRFVDRCDPGTYRLGMRLLELGNLVKARLSVRDAALSPMRGLHRITGQTVNLSVRQGDEI
VYIERAYSERSGMQVVRAIGGHAPLHLTSVGKLFLAADEATRVRAYATRTGLSGHTRNSI
TDLQKLERELGHVRKSGYARDNEELELGVRCIAAGIYDDSGKLVAGLSLSAPADRLQDAW
LVNLNETALQISASLGFHAPSRDASHMASHGVAAE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgacagcagtcaaggcgcggagtcgcgcacgtccattcaggtgatcgagcgc
atgatgcgtttgctcgatgcgctcgccggacatgccgatcccgtcagcctcaaggagttg
gcgcagtccaccgaactccatccctccaccgcacaccgcatcctcaacgacatggtggcc
tgccgctttgtcgaccgttgcgatccgggcacctaccggctcggcatgcgcttgctcgaa
ctcggtaatctcgtcaaagcacgcctgtccgtacgcgacgcagcgctgtcgccgatgcgc
ggcctgcaccgcatcacaggacagacggtcaatctgtcggtccgtcagggcgatgaaatc
gtctacatcgagcgggcctacagcgaacgctcgggcatgcaggtcgtgcgcgccatcggc
ggccatgcgccgttgcatctgacgtccgtcggcaagctgtttctggcggccgatgaagcg
acccgcgtgcgcgcttacgccacgcgcaccggtctgtcgggacacacgcgcaacagcatt
accgatttgcagaagctcgaacgcgagctgggccatgtgcgcaaatcgggctatgcccgc
gataacgaagaacttgaactcggcgtgcgctgcattgcggccggcatttacgacgacagc
ggcaagcttgtcgcagggttgtcgctctctgcaccggccgaccggcttcaggacgcgtgg
ctcgtcaatctgaacgaaaccgcgctccagatctcggcctcgctgggctttcacgcccct
agccgtgacgccagtcatatggcgtcgcacggggtcgcggccgagtaa
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