Pandoraea norimbergensis: AT302_24375
Help
Entry
AT302_24375 CDS
T04226
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pnr
Pandoraea norimbergensis
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnr03016
]
AT302_24375
Enzymes [BR:
pnr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AT302_24375
Transfer RNA biogenesis [BR:
pnr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AT302_24375
Prokaryotic type
AT302_24375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ALS62459
LinkDB
All DBs
Position
complement(3712869..3713681)
Genome browser
AA seq
270 aa
AA seq
DB search
MRIALGIHYDGTAFSGWQSQPHGNTVQQALESALREFGGVALPTTVAGRTDTGVHGIGQV
VHFDTELDRAMFSWVRGVNAFLPKTVAVQWAQAMSDDFHARFIAFERTYFYVLYVHPVRS
PLLEGRCGWLHTPLDLDAMRAAGQALVGEHDFSAFRSSECQAKTPVKHLYAIDIEQQGNF
FVFRFRASAFLHHMVRNIMGCLVAIGRGRQSVDWMAAVLESRDRRQAAPTFMPDGLYLAR
VGYPERFAVPEPNWAAWPFPMPWAQDGTPS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcgcactgggcatccactacgacggcacggcgttttccggctggcaatcgcag
ccgcacggcaacaccgtgcagcaggcgctcgaatccgcgttgcgggagttcggcggcgtc
gccctgccgacgacggtggccgggcgtacggatacgggcgtgcacggcatcgggcaggtg
gtgcatttcgacaccgaactcgaccgggcaatgttctcgtgggtgcgcggcgtgaacgcg
tttctgccgaagaccgtggccgtgcaatgggcgcaggccatgtccgacgacttccacgcg
cgcttcattgcgttcgagcgcacgtacttttacgtgctgtacgtgcatccggtgcgctcg
ccattgctcgaaggccgttgtggctggctgcacaccccgctggatctcgacgccatgcgt
gccgccggtcaggcgctggtcggtgagcacgacttttcggcgttccgctcgtccgaatgt
caggcgaagacaccggtgaagcatctgtacgccatcgatatcgagcagcagggcaacttc
ttcgtgttccgcttccgggcgagcgcgttcctgcatcacatggtgcgcaacatcatgggc
tgtctggtggcgatcggccggggccgtcagtcggttgactggatggcggccgtgctggag
agccgcgaccgccgtcaggccgcgccgacgttcatgccggatggcttgtacctcgcgcgc
gtggggtatcctgagcgcttcgcagtgcccgagcccaactgggcggcgtggccgttcccg
atgccttgggcacaagacggaaccccttcatga
DBGET
integrated database retrieval system
