Pandoraea norimbergensis: AT302_24460
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Entry
AT302_24460 CDS
T04226
Name
(GenBank) adenosine deaminase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pnr
Pandoraea norimbergensis
Pathway
pnr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT302_24460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnr03000
]
AT302_24460
03400 DNA repair and recombination proteins [BR:
pnr03400
]
AT302_24460
Enzymes [BR:
pnr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AT302_24460
Transcription factors [BR:
pnr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AT302_24460
DNA repair and recombination proteins [BR:
pnr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AT302_24460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ALS62476
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All DBs
Position
3733575..3735062
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AA seq
495 aa
AA seq
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MTLDPEVCYKAVSARDRRFDGWFFVGVSSTGIYCRPVCNVRTPRFENCSFYGSAAGAEKA
GFRPCLKCRPELAPGVARFDATRELADAAAAMIDEGFLNRADLPALAARIGITERHLRRI
FADEFGVSPVEYAQTQRLLLAKRLLTDTALPVTEVALASGFGSVRRFNGLFKTRYGFAPG
RLRQTARHAAIPEGDLVFQLAYRPPFAWDALLDFLGNRAIEGVELSDGNTYTRTLRIERE
DGQTLVGWCRITPLPDRHALQVTLPPSLAGCVPQVLGKLRHLFDLGARPDIIDAHLGALA
VPTPGLRVPGAVDGFEIAVRAIVGQQITVKGARRLLGRLAQRFGTPLATPVDGLTHTFPS
AAQMLAVPVDSVGEAGIIRSRIAAIHGVAQAIVDGGLRLDPLAPLEATVKALLAIKGIGP
WTAQYIAMRALGSPDAIPVDDLVLRQALGVPDGRAVAERTAQWAPWRAYAALHVWRAAAQ
GPAGLPVVTLQEICV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttgatcccgaagtctgctacaaagccgtctccgcccgcgaccgccgcttcgac
gggtggttctttgtcggcgtgtcctcgaccggcatttactgccggccggtgtgcaacgtg
cgcacgccgcgcttcgagaactgttcgttctacggcagcgccgccggtgcggaaaaagcc
ggcttccggccgtgcctgaaatgccgcccggaactcgcgcccggcgtcgcccgcttcgat
gccacccgcgaactggccgacgcagccgccgccatgatcgacgaaggcttccttaatcgt
gccgacctgcccgccctcgccgcccgcatcggcatcacggagcgccacctgcgccgcatc
tttgccgacgagttcggcgtctcgccggtcgaatacgcccagacgcagcgcctgctgctc
gccaagcggctgctgaccgatacggcactccccgtcacggaagtggcactcgcgtccggc
ttcggcagcgtgaggcgctttaacggcctgttcaagacgcgctatggctttgcccccgga
cgcctgcgccagaccgcccgtcacgccgcgattcccgagggcgatcttgtctttcaactc
gcctatcgtccgcccttcgcgtgggatgcactgctcgacttcctcggcaatcgcgccatc
gaaggcgttgaactaagcgacggcaacacctacacacgcacgctgcgcatcgaacgcgaa
gacggtcagacgctcgtcggctggtgtcggatcaccccgctgcccgatcgccacgccctt
caggtaacgttgcccccgtccctcgccgggtgcgtgccgcaagtgctcggcaagcttcgc
catctcttcgacctcggcgcccgccccgacatcatcgacgcgcatctcggcgccctcgcc
gtaccgaccccggggcttcgcgtgcccggtgcggtcgatggcttcgagatcgcggtgcgc
gccatcgtcggccaacagatcacagtcaaaggcgcccggcgcctgctgggacggctggcg
caacgcttcggcacgccgctggccacccccgtcgacggcttgacgcatacgtttccgagc
gccgcacaaatgctcgcggtccctgtcgactcggtcggcgaagccggtatcattcgcagt
cgtatcgccgcaattcacggggtcgcgcaggccatcgtcgatggcgggcttcgtctggac
ccgctggccccacttgaggccacggtgaaggcgcttcttgccatcaaaggcatcgggcca
tggacggcgcagtacatcgcgatgcgagccctgggctcgcccgacgccatcccggtcgac
gatctggtgctgcgtcaggccttgggggtgcccgatgggcgcgcagtcgccgaacgcacg
gcgcagtgggccccgtggcgggcttacgcggcgctgcacgtctggcgtgctgcggcgcaa
ggaccggcagggttgccggtcgtcacattgcaggagatttgtgtatga
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