KEGG   Pandoraea norimbergensis: AT302_25810
Entry
AT302_25810       CDS       T04226                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pnr  Pandoraea norimbergensis
Pathway
pnr02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pnr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AT302_25810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pnr03021]
    AT302_25810
Transcription machinery [BR:pnr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AT302_25810
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_7 GerE HTH_24 PhyR_sigma-like HTH_31 HTH_IclR HTH_10 HTH_17 HTH_29 DUF2089 HTH_Tnp_ISL3 DUF434 HTH_26 HTH_3 HTH_40 HTH_22
Other DBs
NCBI-ProteinID: ALS62706
UniProt: A0ABM5WQ69
LinkDB
Position
4035646..4036167
AA seq 173 aa
MQTSGTLLPSTVELLYSNHHSWLKGWLHRRLGSAEQAADIAHDTFVRLLGSERVPAAFDE
PRAYLTTVAQNLVSNHWRREKLERAYLEALAQVPREVEWSPETRAMLLETLIELDRLLDG
LPTIVRQAFLRSQLDGQTHAQVADALGISVPTVKRYLAKALQRCYFADLSFIG
NT seq 522 nt   +upstreamnt  +downstreamnt
atgcaaacgtcgggcaccctcctcccttccactgtcgagttgctttacagcaaccatcac
tcatggctcaagggttggctgcaccggcgtctgggcagtgccgaacaagcggcggatatc
gcgcacgacaccttcgtgcgactgctcggcagtgaacgtgtgcccgcagccttcgatgag
ccgcgtgcttatctcacgacggttgcgcagaatctcgtatccaaccactggcggcgcgaa
aagctcgagcgcgcctatctcgaagcgctcgcccaagtcccgcgtgaagtcgaatggtcg
cccgaaacacgcgccatgctgctcgaaaccctgatcgaactggatcgtctgctcgacggc
ctgcccaccatcgtgcggcaggcttttttgcgttcgcagctcgacggacagacgcatgcg
caagtggccgatgcgctgggtatctcggtgcccacggtcaaacggtatctcgcgaaagcc
ttgcagcgctgctacttcgccgacctgtcctttatcggatga

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