Pandoraea norimbergensis: AT302_25810
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Entry
AT302_25810 CDS
T04226
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pnr
Pandoraea norimbergensis
Pathway
pnr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AT302_25810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnr03021
]
AT302_25810
Transcription machinery [BR:
pnr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AT302_25810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_7
GerE
HTH_24
PhyR_sigma-like
HTH_31
HTH_IclR
HTH_10
HTH_17
HTH_29
DUF2089
HTH_Tnp_ISL3
DUF434
HTH_26
HTH_3
HTH_40
HTH_22
Motif
Other DBs
NCBI-ProteinID:
ALS62706
UniProt:
A0ABM5WQ69
LinkDB
All DBs
Position
4035646..4036167
Genome browser
AA seq
173 aa
AA seq
DB search
MQTSGTLLPSTVELLYSNHHSWLKGWLHRRLGSAEQAADIAHDTFVRLLGSERVPAAFDE
PRAYLTTVAQNLVSNHWRREKLERAYLEALAQVPREVEWSPETRAMLLETLIELDRLLDG
LPTIVRQAFLRSQLDGQTHAQVADALGISVPTVKRYLAKALQRCYFADLSFIG
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgtcgggcaccctcctcccttccactgtcgagttgctttacagcaaccatcac
tcatggctcaagggttggctgcaccggcgtctgggcagtgccgaacaagcggcggatatc
gcgcacgacaccttcgtgcgactgctcggcagtgaacgtgtgcccgcagccttcgatgag
ccgcgtgcttatctcacgacggttgcgcagaatctcgtatccaaccactggcggcgcgaa
aagctcgagcgcgcctatctcgaagcgctcgcccaagtcccgcgtgaagtcgaatggtcg
cccgaaacacgcgccatgctgctcgaaaccctgatcgaactggatcgtctgctcgacggc
ctgcccaccatcgtgcggcaggcttttttgcgttcgcagctcgacggacagacgcatgcg
caagtggccgatgcgctgggtatctcggtgcccacggtcaaacggtatctcgcgaaagcc
ttgcagcgctgctacttcgccgacctgtcctttatcggatga
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integrated database retrieval system