Pandoraea norimbergensis: AT302_26030
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Entry
AT302_26030 CDS
T04226
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
pnr
Pandoraea norimbergensis
Brite
KEGG Orthology (KO) [BR:
pnr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pnr03012
]
AT302_26030
Translation factors [BR:
pnr03012
]
Eukaryotic type
Elongation factors
AT302_26030
Prokaryotic type
AT302_26030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_3rd_SelB
GTP_EFTU_D2
WHD_2nd_SelB
WHD_2nd_SelB_bact
MMR_HSR1
SRPRB
GTP_EFTU_D3
DUF5817_CT
DUF4352
WHD_BLACT
Motif
Other DBs
NCBI-ProteinID:
ALS62744
UniProt:
A0ABN4JS67
LinkDB
All DBs
Position
complement(4093652..4095562)
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AA seq
636 aa
AA seq
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MIVGTAGHIDHGKTSLVRALTGVDTDRLKEEKARGISIELGYAYTPLPDGEVLGFIDVPG
HEKLIHTMAAGAVGIDFALLVIAADDGVMPQTREHLAILTMLGVRQGVVALSKMDRVDIP
RLGRVKREITQWLANTPLAGAQIVPVSATTPGDAGVAVLRDQLTHAAQALKAAGNAARRD
DALFRLAVDRVFTLAGHGTVVTGTAFAGTVRVGDTLTLMPQGLPVRVRSIHAQNRAVEAG
RAGERCALNLAGVERDQINRGDWIVAPGLSAPSTHVDVELHWLDGNAPLTQWFPLHVHLG
TTHVQARTVLLDGDTLAPGGTMRVQLVFDTPVCTMPGDRFIVRNPQATATVGGGRVLDPA
GPERKRRSVARLAWLDAMARTLDGEGLSGLLAQSPQGLTSAQVTALTGLSSTTWQWPSDA
VVLAAADGESLAFAPQPWEAMRTRVLDVLRDYHARLSDEPGLDAARLGRMTWPALEATRW
RAIVQALVADGSLTRTGAWLHLPTHRVEMSAEETALAEALLPRIAQGRFDPPWVRDLGRD
VSAPEERVRAVLRKLARQGRVHQIVKDLFYDDACVQALAELVAQGDGRIEAGGFRDATGL
GRKRAVQILEFFDRAGYTRRVGDTHVRRPGVVWGTA
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcggcacggcgggtcatatcgaccacggcaagacgagtctggtgcgtgccctg
accggcgttgacaccgatcgtctgaaagaagaaaaggcgcgtggcatttccatcgaactg
ggctatgcgtatacaccgctgcccgatggtgaagtcctcggcttcatcgatgttccgggc
cacgagaagttgattcatacgatggcggcgggtgcggtcggcatcgactttgcgctgctg
gtcattgcggcggacgacggcgtcatgccgcagacgcgcgagcatctggcgattctcacg
atgttgggcgtacgtcagggcgtggtggcgttgtcgaagatggatcgggtcgatatcccc
cgcctgggcagggtcaaacgcgagatcacgcagtggcttgcgaacacaccgctggcgggc
gcgcagatcgtaccggtgtcagcaaccacgccgggcgatgcgggcgtcgcggtgttgcgt
gatcaattgacgcacgcggcgcaggcattgaaggcggcgggcaatgcggcgcgccgtgac
gacgcgttgtttcgtctggccgtcgaccgggtattcacgctggcgggtcatggcacggtg
gtcaccggcaccgcgttcgccggaaccgtgcgtgtgggcgatacgttgacgctgatgccg
cagggcttgccggtacgcgtgcgtagcattcatgcgcagaatcgtgccgtcgaagccggc
cgggcaggggagcgttgcgcgttgaatctggcgggcgtggagcgcgatcagatcaaccgt
ggcgattggatcgtcgcaccgggactctcggcaccttctacgcatgtggacgtcgagttg
cattggctcgacggtaatgcgccgctgacgcaatggtttccgctgcacgtacatctgggc
acgacccacgtgcaggcacgtacggtactgctcgatggcgacacgcttgcgccgggcggc
acgatgcgggtgcaactggtgttcgacacgccggtgtgcaccatgccgggtgaccggttc
attgtgcgcaatccgcaggcgacggcgaccgtgggtggcgggcgagtgctggatccggcg
gggccggagcgaaagcggcggtcggtggcgcggctggcgtggctcgatgccatggcgaga
acgctggatggagaagggctctcagggttgctggcgcagtcgccgcaggggctgacgagt
gcacaggtgacggcgctgaccgggttgtcatcgacgacgtggcaatggccgtcggatgcc
gtggtactggcggcggcagacggcgagtcgctggcgtttgcgccgcagccgtgggaggcg
atgcgcacgcgcgtgctcgacgtgctgcgcgactatcatgcgcgattgtccgacgagccg
gggcttgatgcggcgcgtctggggcggatgacatggcctgcgctggaggcgacgcgttgg
cgtgcgatcgtgcaggcgctggtggcggacggctcgttgacacgtaccggcgcatggttg
catttgccgacgcaccgcgtggagatgagtgcggaagagacggcgttggcagaggcgttg
ttgccgcgcattgcgcagggccgattcgatccaccgtgggtgcgtgatctcgggcgcgac
gtgagcgcgccggaagagcgggtgcgcgcggtgctgcgcaaattggcgcgacaggggcgg
gtgcatcagatcgtcaaggatctgttttatgacgatgcctgcgtgcaggcgctagccgaa
ttggtagcgcagggtgatggccggatcgaagcgggcgggttccgggatgcgacaggttta
gggcgcaaacgggcggtgcagattctggaattcttcgaccgcgcgggctatactcgccgc
gttggcgatacgcatgtgcggcgtcccggcgtggtttggggcacggcatag
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