Erythrobacter neustonensis: A9D12_00960
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Entry
A9D12_00960 CDS
T04416
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pns
Erythrobacter neustonensis
Pathway
pns03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9D12_00960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pns03019
]
A9D12_00960
03016 Transfer RNA biogenesis [BR:
pns03016
]
A9D12_00960
Enzymes [BR:
pns01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A9D12_00960
Messenger RNA biogenesis [BR:
pns03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A9D12_00960
Transfer RNA biogenesis [BR:
pns03016
]
Prokaryotic type
tRNA degradation factors
A9D12_00960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
S1_2
YbjQ_1
Motif
Other DBs
NCBI-ProteinID:
ANK11750
UniProt:
A0A192D0S4
LinkDB
All DBs
Position
complement(203753..206050)
Genome browser
AA seq
765 aa
AA seq
DB search
MFDTKTVSLEWGGKTLTLETGRIARQADGAVLATYGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKFSAAGRIPGGFFKRERGATEKETLTSRLIDRPIRPLFPEGFYNEINVICQVLSF
DGETEADIVAMIAASAALTISGVPFMGPIGAARVGFVDGEYTLNPKQDKALIDGRLDLVV
AATQDAVMMVESEAKELTEEEMLGAVMFAHNEIRNVIGAIIDLAEKAAKDPWDVDTSDNT
ADMKAKLKDLIGGDIAAAYKLTDKSARSNALNEARAKAKAAFAEEGGQTQMVAGKLMKKL
EAEIVRTAILKDGQRIDGRKLDQVRPIEAIVGFLPRTHGSSLFTRGETQAICTTTLGTKD
SEQMIDGLEGLSYSSFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALNPVLPSKED
FPYTIRVLSDITESNGSSSMATVCGGCLSMMDAGVPVKAPVSGIAMGLILEGDEFAVLSD
ILGDEDHLGDMDFKVAGTEAGITTMQMDIKVAGITQEIMAKALEQAKAGRQHILGEMAKA
LTGARTEVSKHAPRIETIQIDKSKIRDVIGTGGKVIREIVAETGAKVDIDDEGVIKISSS
NLDEIEAAKKWILGIVEEAEVGKIYNGKVVNIVDFGAFVNFMGGKDGLVHVSEMKNERVE
KPTDVVSEGMEVKVKVLEIDQRGKVRLSMRVVDQETGEELEDTRPAREPREPRGDRGDRG
DRRGPRGGGDRGRGGDRGGRGGDRGGDRGPRESGGPAGLPDFLKD
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacacgaaaaccgtatcgctggaatggggcggcaagaccctcactctggaaacc
gggcgcattgcccgtcaggccgatggtgccgtcctcgcgacctatggcgaaaccgtggtg
ctgtgcgccgtgaccgctgccaagtcggtcaaggaagggcaggatttcttcccgctcacc
gtccactatcaggaaaagttctcggccgccgggcgcatcccgggcggcttcttcaagcgt
gaacgcggcgcgaccgaaaaggaaacgctcaccagccgtctgatcgaccgtccgatccgc
ccgctgttccccgaaggcttctacaacgaaatcaacgttatctgccaggttctgtcgttc
gacggcgaaaccgaagccgatatcgtggcgatgatcgccgcttcggctgcgctgacgatt
tcgggcgtgcccttcatgggcccgatcggcgccgcgcgcgtcggcttcgttgacggcgaa
tacacgctgaacccgaagcaggacaaggcgctcatcgacggccgcctcgacctcgtcgtc
gccgccacgcaggatgcggtgatgatggtcgaatccgaggccaaggaactcaccgaggaa
gaaatgctcggtgcggtgatgttcgcccacaacgagatccgcaatgtcatcggcgcgatc
atcgatctggccgagaaggccgccaaggacccgtgggatgtcgacaccagcgacaacacc
gcggacatgaaggccaagctcaaggacctgatcggcggcgatattgccgctgcctacaag
ctcactgacaagtcggcccgctcgaacgcgctcaacgaagcgcgcgccaaggccaaggca
gccttcgctgaagaaggcggtcagacccagatggtcgctggcaagctgatgaagaagctc
gaagccgaaatcgtgcgcaccgcgatcctcaaggatggccagcgcatcgacggccgcaag
ctcgatcaggttcgcccgatcgaagcgatcgtcggcttcctgccgcgcacgcatggctcg
tcactgttcacccgcggcgaaacccaggcgatctgcaccaccaccttgggcaccaaggac
agcgagcagatgatcgacggtctggaaggcctgagctattcgagcttcatgctgcactac
aacttcccgccctattcggtcggtgaagtgggccgcttcggcgcgccgggtcgccgcgaa
gtgggtcacggcaagctcgcctggcgcgcgctgaaccccgtgctgccgagcaaggaagac
ttcccctacacgatccgcgtcttgtcggacatcaccgaatcgaacggctcgtcctcgatg
gcgaccgtttgcggcggctgcttgtcgatgatggatgcaggcgttccggtgaaggcgccg
gtgtcgggcatcgcgatgggcctgatcctcgaaggtgacgaattcgccgtcctttcggac
attctgggcgatgaagaccacctcggcgacatggacttcaaggtcgccgggaccgaggct
ggcatcaccacgatgcagatggacatcaaggttgccggcatcacgcaggaaatcatggcc
aaggcgctcgagcaggcgaaggccggccgtcagcacatccttggcgagatggccaaggcg
ctgaccggtgcgcgcaccgaagtgtcgaagcacgccccgcgcatcgagacgatccagatc
gacaagtcgaagatccgcgatgtcatcggcaccggtggcaaggtgatccgcgagatcgtc
gccgaaaccggcgccaaggtcgacatcgacgatgaaggcgtgatcaagatctcgtcctcg
aatcttgacgagatcgaagcggcgaagaagtggatcctcggcatcgtcgaggaagccgaa
gtcggcaaaatctataacggcaaggtcgtcaacatcgtcgacttcggcgctttcgtgaac
ttcatgggtggcaaggacggtctcgtccacgtcagcgaaatgaagaacgagcgcgtcgag
aagcccaccgatgtcgtgtcggaaggcatggaagtgaaggtcaaggtgctcgagatcgac
cagcgcggcaaggtccgtctgtcgatgcgcgtcgtcgatcaggaaaccggcgaagaactg
gaagacacccgcccggcacgtgaaccgcgtgaaccgcgcggcgaccgtggtgatcgcggt
gatcgtcgcggcccccgcggcggcggcgaccgtggtcgcggcggtgaccgcggcggacgc
ggcggtgatcggggcggcgaccgtggcccgcgcgaaagcggcggtccggccggtcttccc
gacttcctgaaggactga
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