Erythrobacter neustonensis: A9D12_03925
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Entry
A9D12_03925 CDS
T04416
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
pns
Erythrobacter neustonensis
Pathway
pns02020
Two-component system
pns02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pns00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A9D12_03925
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A9D12_03925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pns03021
]
A9D12_03925
Transcription machinery [BR:
pns03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A9D12_03925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Sigma70_r4
Arg_repressor
HTH_3
YhdX
Motif
Other DBs
NCBI-ProteinID:
ANK12228
UniProt:
A0A192D144
LinkDB
All DBs
Position
complement(832441..833937)
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AA seq
498 aa
AA seq
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MALGPRLDLRQSQSLVMTPQLQQAIKLLAASNLEIETFIAEALEANPLLDTGGPADPGEP
EPIALAAPAGEDAPADQLMLAGGGEGDAPLDLASVDRDFDTGDGAGPGLRDAEWGAAGAP
GTDLADLPDWEQLRAAEVTLCEHLEAQVGLKTRDPQVSAVARRLIGLLDDAGYLTTPLGE
VAGDLGVGSDLVEAALALVQSLDPTGVGARDLAECIALQAREADRYDPCMAMLIANLDLV
ARGEVARLKRLCRVDDEDFADMLRELRSYDPRPGLAFAACDTSSVIPDIIITANAAGGWD
IALNEDTLPRLIVNRGYYVELNAGATSRESQGWLKEKLADAHWLIRALDQRQKTILKTAA
EIVKQQDGFFRRGVAELRPLTLREVAEKIEMHESTVSRVTSNKYLACARGTFELKYFFTS
GVASADGEGASSAAIKARIKALIDAETVKAILSDQQLADMLQKEGFDLARRTVAKYREAI
GLGSSAERRRAKKMAGVR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcattaggcccgcgccttgatctgaggcagtcgcaatcgctggtgatgacgccgcaa
ttgcagcaggcgatcaagctgctggcggcctccaacctcgaaatcgaaaccttcatcgcc
gaggcgctggaggccaatcccttgctcgacaccggcgggccggccgatccgggcgagccc
gagccgattgcccttgccgcccctgcgggcgaggatgcgcctgccgatcagctgatgctg
gcgggcgggggcgagggcgatgcgccgctcgatctggcttcggtcgaccgcgatttcgat
accggcgacggcgcggggccggggctgcgcgatgccgaatggggcgcggccggcgcgccg
ggcaccgaccttgccgacctgcccgactgggagcagctgcgcgccgccgaggtcacgttg
tgcgagcatctcgaagcgcaggtcgggctcaaaacccgcgatccgcaggtcagcgcggtc
gcccgccgtctgatcggactgctcgacgacgcgggttacctcaccacgccgctcggcgaa
gttgccggcgatctgggggtcggcagcgacctggtggaggcggcgctggcgcttgtgcaa
tcgctcgatccgaccggggtaggcgcgcgcgatctagccgagtgcatcgcgcttcaggcg
cgcgaggcggaccgctacgatccgtgcatggcgatgctgatcgccaatctcgatctggtg
gcgcgcggcgaggtcgcgcggctcaaacgtctgtgccgggtcgacgacgaggatttcgcc
gacatgctgcgcgaattgcgcagctacgatccgcgacccggtctcgcctttgctgcctgc
gatacgagttcggtgatccccgacatcatcatcaccgccaatgccgcgggcgggtgggac
atcgcgttgaacgaggacacgctgccgcgcttgatcgtcaaccgcggctactatgtcgaa
ctcaacgcgggcgcgaccagccgcgaatcgcaaggctggctgaaggaaaagctggcggac
gcgcattggctgatccgcgcattggaccagcggcagaagacgatcctcaagaccgcagcc
gaaatcgtgaagcagcaggacgggttcttccgccgcggggtagccgaactgcgcccgctg
accttgcgcgaggtggccgagaagatcgaaatgcatgaaagcacggtcagccgcgtcacc
agcaacaagtatctcgcctgcgcacggggcacgttcgaactgaagtatttcttcaccagc
ggggtcgcctcggccgatggcgagggcgcatcatcggctgcgatcaaggcgcggatcaag
gcgctgatcgatgccgagacggtaaaggcgatcctgtccgatcaacagcttgccgacatg
ctgcaaaaggaaggtttcgatctggcgcggcgcacggtcgccaaatatcgcgaggcgatc
gggctggggtcgagcgcggagcgccggcgcgccaagaagatggccggggtgcgctga
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