Erythrobacter neustonensis: A9D12_04315
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Entry
A9D12_04315 CDS
T04416
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pns
Erythrobacter neustonensis
Pathway
pns00061
Fatty acid biosynthesis
pns00071
Fatty acid degradation
pns01100
Metabolic pathways
pns01212
Fatty acid metabolism
pns02024
Quorum sensing
pns04146
Peroxisome
Module
pns_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pns00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
A9D12_04315
00071 Fatty acid degradation
A9D12_04315
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
A9D12_04315
09145 Cellular community - prokaryotes
02024 Quorum sensing
A9D12_04315
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pns01004
]
A9D12_04315
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pns04147
]
A9D12_04315
Enzymes [BR:
pns01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
A9D12_04315
Lipid biosynthesis proteins [BR:
pns01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
A9D12_04315
Exosome [BR:
pns04147
]
Exosomal proteins
Exosomal proteins of breast milk
A9D12_04315
Exosomal proteins of breast cancer cells
A9D12_04315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
DUF3248
Motif
Other DBs
NCBI-ProteinID:
ANK12299
UniProt:
A0A192D3G7
LinkDB
All DBs
Position
complement(916323..918002)
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AA seq
559 aa
AA seq
DB search
MTVSNFSPARSAAYHHPTPLGTIFTPASLPALFERTLHRNPDAPFLHFLGRTYSYKQIYA
QAQAFALGLSRAGIVKGDRVGLFLPNVPIYAAAYYGSMMAGAVVVNFSPLYSVEELSWQV
GDSGTKVLVTVDVPELYKTAKKVLDASTLETLVVGSLADQLPRLKGVAMKLLKRSQIADV
AYGAKVKSWAGMTPAGTPPKVAVGPEDLALLQYTGGTTGRPKGAMLGHDQLSVNAQQVAG
INPFGNPAGEVFVGALPFFHVFANTALLNHAMVTGGSIAMVPRFDAGQVLAIIQKYRCTG
FPGVPTMFQALLDHPDLAKTDLSSLKVCISGGAPMPAPVHERFEAVTGVRIAEGYGLTES
SGVVSANPYQGTRKRGTIGQLVPGTEVILLDKENPENLAPEGEPGELAVCGPQIMRGYWQ
RPESDADTFVRRDGKCYLRTGDVARIDEDGFLEIVDRIKDMIAVNGFKVFPSVVEDVILE
HAAIKEALVIGVPDDARGEVPRAYVTLNEGATETGAELASWLNARIGKHERVDQVVVRDS
LPKTMIGKLDRKTLRAEVL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcagtaacttttcccccgcccgatccgccgcctatcatcaccccacaccgctc
ggcacgatcttcacgccggcgagcctgcccgcgctgttcgaacgcacgctgcaccgcaac
ccggatgcgccgttcctgcatttcctcgggcgcacctacagctacaagcagatttacgcg
caggcacaggcctttgcgctgggtctgtcgcgggccgggatcgtcaagggcgaccgggtc
ggcctgttcctgcccaacgtgccgatctatgccgccgcctattacggctcgatgatggcg
ggcgcggtcgtggtgaacttctcgccgctctattcggtcgaggaactgtcctggcaagtc
ggcgacagcggcaccaaggtgctggtgacggtcgatgtgcccgaactctacaagaccgcg
aagaaggtgctcgatgcctcgacgctggaaacgctggtggttggcagcctcgcggaccag
cttccacggctcaagggcgtcgcgatgaagctgctgaagcgcagccagatcgccgatgtt
gcttatggcgccaaggtcaaaagctgggccgggatgacgcctgcgggcacgccgcccaag
gtcgcggtggggccggaagacctcgccctgctgcaatataccggcggcaccaccgggcgg
cccaagggcgcgatgctcgggcatgaccagctgtcggtcaacgcgcagcaggtcgccggc
atcaaccccttcggcaatcccgcgggcgaggtgttcgtcggcgcgctgccgttcttccac
gtcttcgccaacaccgccctgctcaaccacgcgatggtgaccggcgggtcgatcgcgatg
gtgccgcggttcgatgcgggccaagtgctggcgataatccagaaataccgctgcaccggt
tttcccggcgtgccgacgatgttccaggcgctgctcgaccatcccgatctcgccaagacc
gatctgtcgagcctcaaggtctgcatctcgggcggggcgccgatgccagcgccggtgcac
gaacgcttcgaggcggttaccggggtgcggattgccgaaggctatggcctgaccgaaagt
tcgggcgtggtctcggccaacccctatcagggcacccgcaagcgcgggacgatcgggcag
ctggtgccgggcaccgaagtaattctgctcgacaaggaaaaccccgaaaacctcgccccc
gagggcgagccgggcgagcttgcggtgtgcgggccgcagatcatgcgcggctattggcag
cgaccggaaagcgatgccgacactttcgtccggcgcgacgggaaatgctatctgcgcacc
ggcgatgtcgcgcggatcgacgaggacggcttcctcgagatcgtcgaccggatcaaggac
atgatcgcggtcaatggcttcaaggtcttccccagcgtggtcgaggacgtgatcctcgaa
cacgccgcgatcaaggaagcgctggtgatcggcgttcccgacgatgcccggggcgaagtg
ccgcgcgcctatgtcaccttgaacgaaggcgcgaccgaaaccggggccgagctggcaagc
tggctcaacgcgcggatcggcaagcacgagcgcgtggatcaggtggtggtgcgcgacagc
ctgcccaagaccatgatcggcaagctcgaccgcaagaccctgcgcgccgaggtgctctga
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