Erythrobacter neustonensis: A9D12_08135
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Entry
A9D12_08135 CDS
T04416
Name
(GenBank) recombinase RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pns
Erythrobacter neustonensis
Pathway
pns03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A9D12_08135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pns03400
]
A9D12_08135
Enzymes [BR:
pns01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A9D12_08135
DNA repair and recombination proteins [BR:
pns03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A9D12_08135
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
HHH_2
NAT10_TcmA_helicase
nSTAND3
AAA_23
PIF1
AAA_28
AAA_29
HHH
DEAD
NTPase_1
RsgA_GTPase
AAA_22
UvrD-helicase
AAA_16
HHH_3
AAA
ABC_tran
SLFN-g3_helicase
ABC_ATPase
NPHP3_N
TrwB_AAD_bind
AAA_15
SMC_N
PhoH
Flavi_DEAD
T2SSE
cobW
Motif
Other DBs
NCBI-ProteinID:
ANK12918
UniProt:
A0A192D356
LinkDB
All DBs
Position
1751904..1754132
Genome browser
AA seq
742 aa
AA seq
DB search
MNQAASPATEVLVGHVERVTFHSDESGFCVLRVKARGHRDLVTTVGHAAMISAGEWITAS
GEWVNDRHHGLQFRARFLKTSEPSSIEGIEKYLGSGMIRGIGPVYAKRMVRLFGKDVFDV
IEASPERLREVEGIGPKRAAKITTAWADQKVIREIMVFLHSHGVGTARAVRIFKTYGADA
VQVMSDNPYRLARDIRGIGFRTADTIAEKLGIEKTAMVRVRAGVSFALTQAMGEGHCGLP
VTDLKELTARLLEVDSALIETALALELDDGTVVADSVAGQACVFLGGLYHAEKVIAARLH
ALMDGPLPWSMIDPGKALPWIEGRTGLTLAASQKEAVTLALQSKLTVITGGPGVGKTTIV
NAILRIVAAKAVKLLLCAPTGRAAKRMTEATGMEAKTIHRLLEFDPKAFGFKRNEENPLS
CDLLVVDESSMVDVMLMQSLLKAVPDTAAVLIVGDIDQLPSVGPGQVLADIIQSGAVPVV
RLTEVFRQAAQSRIITTAHQINQGRSPELGKVEGESDFYFVSAADPEQAGLKIIDLVGKH
IPRKFGFDPVRDVQVLCPMNRGGVGARSLNIELQKALNPNPSAKVERFGWSFAPGDKVMQ
IENDYDKDVFNGDIGYIQAIDSEESELTVDFDGRVVTYQFGELDTLVPAYAATIHKSQGS
EYPAVVIPVMTRHYAMLQRNLLYTGVTRGKKLVVLVGQPRAIAIAVRNAAGRRRWSKLNE
WLGMPTPGCSRTAEKLRASPDG
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggcagcgtcccctgcgaccgaagtgctggtcgggcatgtggaacgggtcaca
ttccacagtgacgagagcggattttgtgtcctgcgcgtcaaggcccgtggccatcgtgat
ctggttacgaccgtgggccatgctgcgatgatttcagccggggagtggatcaccgcctcc
ggcgagtgggtcaatgatcgccaccacgggctccagttccgggccaggtttctcaagaca
tcggagccctcatcgatcgaagggatcgagaagtatctgggctcgggcatgatccggggc
attgggccggtctatgccaaacgcatggtcaggttgttcggcaaggatgtgtttgacgtc
atcgaggccagtccagagcggttgcgcgaggtcgaagggattggtccgaagcgcgctgcg
aagatcactaccgcctgggcggatcagaaggttattcgcgagatcatggtctttctgcat
agccatggtgtcgggacagcccgagctgtgcgcatattcaagacctatggcgccgatgcc
gtccaggtgatgagcgataatccctatcgcctggcgcgcgacattcggggcatcggattc
agaaccgccgacaccattgcagagaagctcgggatcgagaagaccgccatggtgcgggtg
agggcaggggtgtccttcgcgctcacacaggcgatgggggaggggcactgcggcctgccg
gtgacagacctcaaggaactgacagcccggcttctcgaagtcgacagcgccttgatcgag
accgcgctggcgctggaactggatgatggcacggtggtcgccgatagtgtggctgggcag
gcgtgcgtatttctgggcggcctctatcacgccgagaaggtcatcgctgcccggctccac
gccctgatggacggacccttgccctggtcgatgatcgatccgggcaaggcactgccatgg
attgaggggcgcacgggcctgactctagccgcaagccaaaaggaggctgtcacgctggcc
ctgcaatccaaactcaccgtgatcaccggcggccctggcgttggcaaaaccaccatcgtc
aatgcgatcctgcggattgtcgccgccaaggcggtcaagcttttgctctgtgcgcccaca
ggccgggcggccaagcggatgaccgaggcgacgggcatggaggcaaagaccattcaccgc
ctgcttgagtttgatcccaaggcgttcggattcaagcgcaatgaggaaaacccgctgtca
tgtgatctgctggtggtcgacgagagctcgatggtcgacgtgatgctgatgcagtcgctg
ctgaaggccgtgcccgacactgccgccgtgctgatcgtcggtgacattgaccagctaccc
tcggtcgggccggggcaggtccttgccgacatcatccagtccggcgcagtgccggtagtc
cggttgaccgaggtgtttcgccaggccgcacagagccggatcatcaccactgcccatcag
atcaaccagggccggagccctgaattgggcaaggttgaaggcgagagcgatttctatttc
gtgtcagccgcagatcccgagcaggccgggctcaagatcatcgatcttgtgggcaagcat
atcccccgcaaattcgggttcgaccccgtgcgggatgttcaggtcctgtgcccgatgaac
cgcggcggggtcggcgcgcgctccctcaacatcgaattgcagaaggcgctcaatcccaat
ccttccgccaaggtcgagcggttcggatggagctttgcccccggcgacaaggtgatgcag
atcgagaatgattacgacaaggacgtgttcaatggggacatcggttacattcaggccatc
gattccgaagagagcgagttgacggtcgatttcgacggccgcgtggtcacctaccagttc
ggagaactggacactctggtgccagcttacgccgcgacgatccacaagagccagggatcc
gaatacccagcggtcgtgatcccggtcatgacccggcattacgcgatgctgcagcgaaac
ctgctctacaccggagtcacccgcggcaagaagctggtggtgctggtcggccagccccgg
gccatcgcgatcgccgtcagaaatgccgcgggtcgccgccgctggtccaagctcaacgag
tggctcgggatgccaacgccaggctgtagccgcaccgccgagaagctgcgcgcttcgcca
gacggctga
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