Erythrobacter neustonensis: A9D12_10685
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Entry
A9D12_10685 CDS
T04416
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pns
Erythrobacter neustonensis
Brite
KEGG Orthology (KO) [BR:
pns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pns03016
]
A9D12_10685
Enzymes [BR:
pns01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A9D12_10685
Transfer RNA biogenesis [BR:
pns03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A9D12_10685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
CAF1
Motif
Other DBs
NCBI-ProteinID:
ANK13330
UniProt:
A0A192D5H4
LinkDB
All DBs
Position
complement(2301460..2302707)
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AA seq
415 aa
AA seq
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MKIHPLITTTEALTELCERLAKSDFVAVDTEFMRENTYWPELCLVQIANTEEAAAIDPMA
PGIDLAPLLDLMCDNEDVLKVFHAGSQDVEIIVNLTGKTPHPIFDTQIAMMAISQSEQIG
YANLVETWVGITIDKGARFTDWSRRPLSDRQIEYAIGDVTHLAGIFPKILKKLIKTGRGL
WLDAEMEKLADPANYLTDPQVAWKRIRQPGRNPQVLGRMKALAAWREAEAQHKNIPRGRI
MRDETLADIASHPPKVQGDLAKVRGLSPAWKDNDIGKRLMKILAEADPLPKSEMPEKIKQ
GAPLGKEGALVADLLKLLLKIRAREIDVAPRLLTRADEMEALAAGARDLPVLEGWRYEVF
GKDALDLVEGKVAFAVEKGRMKMTHIDDVAPQAQPAADPVEGSDDTALPGTLAAQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccatccgctgatcaccaccaccgaagcgctcaccgaactgtgcgagcggctt
gcgaaatccgatttcgtcgcggtcgacaccgaattcatgcgcgagaacacctactggccc
gaactgtgcctggtgcagatcgccaacaccgaagaagccgccgcgatcgatccgatggcg
ccggggatcgaccttgcgccgctgctcgatctgatgtgcgacaacgaggacgtgctcaag
gtcttccacgccggatcgcaggatgtcgaaatcatcgtcaacctcaccggcaagacccct
cacccgatcttcgacacgcagatcgcgatgatggcgatcagccagtccgaacagatcggt
tatgccaatttggtcgaaacatgggtcggcatcacgatcgacaagggcgcaaggttcacc
gactggagccgccgccccttgagcgatcggcaaatcgaatatgcaatcggcgatgtgacg
catttggccgggattttccccaagatcctcaagaagctgatcaagaccgggcgcgggctg
tggctcgatgccgaaatggaaaagctcgccgatccggcgaattatctcaccgatccgcag
gtggcatggaagcgcatccgccagccggggcgcaatccgcaggtgcttggccggatgaag
gcgcttgcggcatggcgcgaggccgaggcgcagcacaagaacatcccgcgcgggcggatc
atgcgcgacgaaacgcttgccgacatcgccagccatccgcccaaggtgcaaggtgacctt
gccaaggtgcgcgggctttcgccggcgtggaaggacaacgacatcggcaagcgcctgatg
aagatcctagccgaagccgatccgctgcccaaaagcgagatgcccgagaagatcaagcag
ggtgcgccgctgggcaaggaaggcgcgctggtcgccgatcttctgaagctgctgctcaag
atccgcgcgcgcgaaatcgatgtcgccccgcgcctgctcacccgcgccgacgagatggaa
gcgcttgccgccggcgcacgcgatctgccggtgctcgagggctggcgttacgaggtgttc
ggcaaggacgcgcttgaccttgtcgaaggcaaggtcgcctttgcggtcgaaaaaggccgg
atgaagatgacgcatatcgacgatgtcgctccgcaggctcaacccgcagccgatcccgtg
gaaggatcggacgataccgccctacccggcacgctggcagcgcagtag
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