Erythrobacter neustonensis: A9D12_10840
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Entry
A9D12_10840 CDS
T04416
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pns
Erythrobacter neustonensis
Brite
KEGG Orthology (KO) [BR:
pns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pns03032
]
A9D12_10840
03400 DNA repair and recombination proteins [BR:
pns03400
]
A9D12_10840
Enzymes [BR:
pns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A9D12_10840
DNA replication proteins [BR:
pns03032
]
Prokaryotic type
DNA Topoisomerases
A9D12_10840
DNA repair and recombination proteins [BR:
pns03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A9D12_10840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ANK13356
UniProt:
A0A192D5R1
LinkDB
All DBs
Position
2334904..2337513
Genome browser
AA seq
869 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGKDFKVLASYGHVRDLPPKDGSVKPDEDFAMDWELYRDKQS
RFKEIADAAKGASRLVLATDPDREGEAISWHVQELLKKRKSLPAKVDRVTFNAITKQAVT
EAMTRPRDLDQPLIDAYLARRALDYLFGFTLSPVLWRKLPGAKSAGRVQSVALRLIVERE
REIEAFRADEYWSVVARLMHDGTAFDARLVKFRGEKLERLSLGTEGIAMEAKAAVEAGRF
TVEGVETKPVKRNPAPPFTTSTLQQEAARKLGYSAQHTMRLAQSLYEAGAITYMRTDGVQ
MDMSAIHAARDAIAARFSPDYRPEKPRMYSTKAKNAQEAHEAIRPTDFTRERAGTGDEAK
LYDLIFKRAMASQMATALLERTTVTLRDPTGQHELRATGQVVKFPGFLAVYQESFDDSDD
EDGSLLPVLKNGDLPAKRSVDATQHFTQPPPRFSEASLVKRLEELGIGRPSTYASTIQTL
RDRAYVRVEKNRFFAEESGRLLTAFLERFFPTYVAYDFTAGMEDELDVVSDGREEYKVLL
ERFWRDFKPKADEVMEKLPSEVTEALDEYLADFLFPPREDGSDPRACPLCAAEGRDGGRL
ALRGGKFGAFVACANYPECKYTRRFAQPGADGGDGAEDGIMGQHPETGENILRKTGRFGP
YVEMGEGKEAKRASIPKDLDDFDLDWAVKLLGLPRIIGAHPETALEIEANIGRYGPYLRH
DGKYGRLTNTREVFEVGMNRAVDILAQAATRGGAARGKSEPIATLGAHPTSGGEIKVMPG
RYGPYVTDGTTNATIARDMKPEDVTLAIAIELIDARAAKGPAKGKKKKAAPKKAPAKKPA
AKKAAAKKPAAKKAPAKKPAAKKATPATN
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcgtcatcgtcgaatcccccgccaaagcgaaaaccatcgagaaatatctcggc
aaggacttcaaggttctcgcgtcctatggccacgtccgcgatctgccgcccaaggatggc
agcgtgaagcccgacgaggacttcgcgatggactgggaactctaccgcgacaagcagagc
cgcttcaaggaaatcgccgacgcggccaagggcgccagccgcctcgttctcgccaccgac
cctgatcgtgagggcgaggcgatcagctggcacgtgcaggagctgctgaagaagcggaaa
agcctgcccgccaaggtcgaccgcgtcaccttcaacgcgatcaccaagcaggcggtgacc
gaggcgatgacccgcccgcgtgacctcgatcaaccgctgatcgatgcctatctcgcgcgc
cgcgcgctcgactatctgttcggcttcaccctgtcgccggtgctgtggcgcaagctgccg
ggcgcaaaatcggcgggccgcgtgcaatcggtcgcgctgcgtctgatcgtcgagcgcgag
cgcgagatcgaggccttccgcgcggacgaatactggagcgtggtcgcgcgcctgatgcac
gatggcaccgcgttcgatgcgcgcctcgtcaagttccgcggcgaaaagcttgagcgcctg
agcctcggcaccgagggcatcgccatggaagccaaggccgcggtcgaagccgggcgtttc
actgtcgaaggcgtggagaccaaaccggtcaagcgcaaccccgcgccgccgttcaccacc
tcgacgctgcaacaggaagccgcgcgcaaactgggctattcggcgcagcacacgatgcgg
ctggcgcagagcctctatgaagcgggcgcgatcacctacatgcggaccgacggcgtgcag
atggacatgagcgcgatccacgccgcgcgcgatgcgatcgcggcgcgcttcagccccgac
tatcgccccgaaaagccgcggatgtattcgaccaaggccaagaacgcgcaggaagcgcac
gaggccatccgtccgaccgatttcacccgcgaacgtgccggcacgggcgacgaggcgaag
ctgtacgacctcatcttcaagcgcgcgatggcgagccagatggcgaccgcgctgctcgaa
cgcaccacggtcacgctgcgcgatccgaccgggcagcacgaactgcgcgccaccggacag
gtggtgaaatttccgggcttccttgcggtctatcaggaaagcttcgacgacagcgatgac
gaggacggcagtctgctgcccgtgctgaaaaacggcgatctgcccgccaagcgcagcgtc
gatgcgacccagcacttcacccagccgccgccgcgcttttccgaagcgtcgctggtcaag
cggctggaggaactcggcatcgggcgcccatcgacctatgcctcgaccatccagaccctg
cgcgaccgcgcctatgtgcgggtggagaagaaccgctttttcgccgaggaatcgggccgt
ctcctgaccgcttttctcgaacgcttcttcccgacctatgtcgcctatgatttcaccgcc
gggatggaggacgagctcgatgtcgtctccgacgggcgcgaggaatacaaggtgctgctc
gaacggttctggcgcgatttcaagcccaaggccgacgaggtgatggagaagctaccctcg
gaagtgaccgaggcgctcgacgaatatctcgccgatttcctgttccccccgcgcgaggac
ggcagcgacccgcgcgcctgcccgctgtgcgcggccgaagggcgcgatggcggcaggctg
gcgctgcgcggcggcaagttcggtgcgttcgtggcctgcgccaactatcccgaatgcaaa
tacacccgccgctttgcccagccgggcgctgatggcggggacggggccgaagacgggatc
atgggccagcatcccgaaaccggcgagaacattctgcgcaagaccgggcggttcggcccc
tacgtcgaaatgggcgagggcaaggaagccaagcgcgcgagcatccccaaggatctcgac
gattttgatctcgactgggcggtgaaactgctgggcctgccgcgcatcatcggcgcgcac
cccgagaccgcgctcgagatcgaggcgaatatcgggcgttacgggccttacctgcggcat
gacggcaagtatggccggctcaccaatacccgcgaggtcttcgaggtagggatgaaccgc
gcggtcgatatcctcgcgcaggccgccacccgcggcggcgcggcgcgcggcaagtccgaa
cccatcgccacgctcggcgcgcaccccaccagcgggggcgagatcaaggtgatgccgggc
cgctatggcccctatgtcaccgacggcaccaccaacgcgacgatcgcgcgcgacatgaag
cccgaggacgtgacgctcgccatcgcgatcgaactgatcgatgcgcgcgcggcgaaaggc
ccggccaagggcaagaaaaagaaggccgctcccaagaaagcgcccgccaagaagcctgcg
gcaaagaaggcggcggcaaaaaaaccggcggccaagaaggcgcccgccaagaagcccgcg
gcaaagaaggccacgcctgcgacgaactga
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