Pseudomonas nitroreducens: G5B91_02770
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Entry
G5B91_02770 CDS
T08828
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pnt
Pseudomonas nitroreducens
Pathway
pnt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G5B91_02770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnt03021
]
G5B91_02770
Transcription machinery [BR:
pnt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G5B91_02770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
PhyR_sigma-like
Rv2175c_wHTH
MerR
HTH_17
HTH_24
HTH_29
Sigma70_r3
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QIE85249
LinkDB
All DBs
Position
complement(571185..571703)
Genome browser
AA seq
172 aa
AA seq
DB search
MSAIQMGSGELVGALYRAHRDWLTAWLNRSLGCPQRAEDLSQDTFVRVLGRRELPSLREP
RAFLVTVAKGLLVDHWRRVALEQAYLEELKFLPEAVQPSAEEHCLILADLREIDRLLGKL
STRARSAFLLNRLDGLGHAEIAEQLGVSVPRVRQYIAQGLRQCYIALYGEPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggccatccagatgggtagcggcgaactcgttggcgccttgtatcgcgctcaccgc
gactggctgactgcctggctgaaccgcagcctgggctgtccgcagcgcgccgaagacctg
agccaggacaccttcgtccgcgtgctcggccgtcgcgagctgccttccctgcgcgaaccg
cgcgccttcctggtcaccgtcgccaagggcctgctggtggatcactggcgccgcgtggcg
ctggagcaggcctacctggaagaactgaagttcctgcccgaagccgtgcagccgtcggcc
gaggaacactgcctgatcctcgccgacctgcgcgagatcgaccgtctgctgggcaagctg
tccacccgcgcgcgcagcgccttcctgctcaaccgcctggatggcctgggccacgccgag
atcgccgagcagttgggcgtttccgtgccgcgggtacgccagtacatcgcccagggcctg
cgccagtgctacatcgccctgtacggcgagccgacgtga
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