Pseudomonas nitroreducens: G5B91_04525
Help
Entry
G5B91_04525 CDS
T08828
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pnt
Pseudomonas nitroreducens
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnt03000
]
G5B91_04525
Transcription factors [BR:
pnt03000
]
Prokaryotic type
Helix-turn-helix
Other families
G5B91_04525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
PAS_4
Diguanyl_cycl_sensor
AAA_5
HTH_23
PAS_9
HTH_30
PAS_8
HTH_32
PAS
HTH_7
Mg_chelatase
HTH_29
AAA_2
HTH_50
HTH_17
HTH_22
HTH_AraC
HTH_28
HTH_20
HTH_psq
HTH_1
AAA
IclR_C
Motif
Other DBs
NCBI-ProteinID:
QIE85570
UniProt:
A0A6G6IRX7
LinkDB
All DBs
Position
924400..926316
Genome browser
AA seq
638 aa
AA seq
DB search
MRANDLSRHARQVMTVAEGKARAGAPGADPSIARSWMRCLEQYHLDPAQPMAPTVLEHAR
MLEVREHHRQVLEIASGEMNSLHQQLSGAGHAVLLTDSRGVILNCVSEAAERRTFEQAGL
WLGADWSEAREGTNGIGTCLVERQALTIHQDEHFRSRHTGLTCSASPVFDPQGELLAVLD
VSSARRDVSRQSQFHTMALVNLSAKAIESCYFLRHFEDQWLLRFHLQPDGLGLFSEGLLA
FGADGRIRAANQSAINLLGSRRDSLIGRSLEQFFDCRLDDLFSRADPQPNASWPLRTHAG
RTLYALLRGRRPIAAAPVLPRAPLAKGLCIDDPQLAHDFRRALKVYAHDVPLLLQGETGT
GKEAFARAVHLGGERAGKAFVALNCAAIPETLIESELFGYRGGSFTGARKEGMRGKLQQA
DGGTLFLDEIGDMPLALQTRLLRVLEERQVVPIGGEPLDVDIRLISASHRDLEALVAAGQ
FREDLYYRLNGLVVALPPLREREDRGALLDHLLAEESKGRSVRLDDDVRRHLLDFPWPGN
VRQLRNVLRTLCALCEGGRIHMTDLPADLRRTSAPVLVAVPVSEEGGDTLGAAERDALLA
VLEAQRWHVSRAAQQLGISRNTLYRKLNRHGLNRRTLS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccaacgatttgagccgccacgcccgccaggtcatgaccgtggccgagggcaag
gcccgcgccggagcacctggtgcggacccatcgatcgcccgctcctggatgcgctgcctg
gagcagtaccacctcgacccggcgcaacccatggcgccgacggtgctggaacatgcgcgc
atgctcgaagtccgcgagcaccatcgccaggtgctggaaatcgccagcggcgagatgaac
agcctgcaccagcagctctccggcgccggccatgcggtgctgctcaccgattcccgtggc
gttattctcaattgcgtgagcgaagccgccgagcgccgcacgttcgagcaggccgggctg
tggctcggcgccgactggagcgaagcgcgcgagggcaccaacggtatcgggacctgcctg
gtggagcgtcaggcgctgaccattcaccaggacgaacatttccgcagccgccacaccggg
ctgacctgctcggccagcccggtgttcgacccgcagggcgagctgctggcggtgctcgac
gtttcctccgcgcgccgcgatgtgtcgcggcagagccagttccacaccatggcgctggtc
aacctgtcggccaaggccatcgagagctgctacttcctgcggcatttcgaggaccagtgg
ctgctgcgcttccacctgcagccggacggcctcggcctgttcagcgaaggcctgctggct
ttcggcgctgacgggcgaatccgcgcggcgaaccagagcgcgatcaacctgctcggcagc
cgccgggacagcctgatcggccgctcgctggaacagttcttcgattgccggctggacgac
ctgttcagccgcgccgacccgcagcccaatgccagttggccgttgcgcacccacgctggc
cgcactctctatgcgctgctgcgcggccggcgccccatcgccgccgcgccggtgctgccg
cgtgcgccgctggcgaaagggctgtgcatcgacgatccgcaactggcccatgatttccgc
cgggcgctgaaggtctacgcccacgacgtgccgctgttactgcagggcgagaccggcacc
ggcaaggaagctttcgcccgcgccgtgcacctgggtggcgaacgtgccggcaaggctttc
gtcgcgctgaactgcgcggcgatccccgagaccctgatcgagagcgagctgttcggctac
cgcggcggcagcttcaccggcgcgcgcaaggaaggcatgcgcggcaagttgcagcaggcc
gacggcggcacgctgttcctcgacgagatcggtgacatgccgctggcgttgcagacgcgc
ctgctgcgcgtgctggaagagcgccaggtagtgcccatcggcggcgagccgctggacgtc
gacatccgcctgatcagcgccagccaccgtgacctggaagcgctggtggccgccgggcag
ttccgtgaagacctctactatcgcctcaatggtttggtcgtcgcattgccgccgctgcgc
gagcgcgaagaccgtggtgcgttgctcgatcaccttctggccgaggagagcaagggccgc
tcggtgcgactggacgacgacgtgcgccgacacctgctcgatttcccctggccgggcaac
gtgcgccagctgcgcaacgtgctgcgcacgctctgtgcgctgtgcgagggcggacgcatc
catatgaccgacttgccggcggacctgcgacgtacttcggctcccgttcttgttgcggta
ccggtgagcgaggagggcggcgacaccctcggcgccgccgagcgcgacgcactgctggca
gtgctggaagcgcagcgctggcacgtcagccgcgccgcgcagcagctgggcatcagccgt
aacacgctgtaccgcaagctcaatcgccacggcctgaaccggagaactctttcgtag
DBGET
integrated database retrieval system
