Pseudomonas nitroreducens: G5B91_04640
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Entry
G5B91_04640 CDS
T08828
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pnt
Pseudomonas nitroreducens
Pathway
pnt02025
Biofilm formation - Pseudomonas aeruginosa
pnt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
G5B91_04640 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
G5B91_04640 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pnt02044
]
G5B91_04640 (tssH)
Secretion system [BR:
pnt02044
]
Type VI secretion system
Imp/Vas secretion system core components
G5B91_04640 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
AAA_25
Sigma54_activat
nSTAND3
AAA_7
AAA_18
NACHT
AAA_14
TniB
Zeta_toxin
AAA_29
RuvB_N
Rad17
AAA_30
Clp_N
NBD_SMAX1
T2SSE
DUF815
Hpr_kinase_C
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QIE85592
UniProt:
A0A6G6IRH7
LinkDB
All DBs
Position
complement(953691..956354)
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AA seq
887 aa
AA seq
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MSDISRLSLFGRLSPLLYRSLEGATAFCKLRGNPYVELSHWLQQVLEEPGSDLRCAITHF
DLDEGRLRLDLQHALDALPRGASSVSDFAEMIDLSVERSWVYCSLLFEAPRVRSSHLLLA
CLRQSSLRSVLLGISGQFGKILPDLLIQSHDSIFANSPEQPAPDDLPQVPSGTEAGSALQ
RFAVDLTERARRGELDPVYGRDEEVRQMIDILMRRRQNNPLLTGEAGVGKTAIVEGLAIR
LARGDVPKKLQGVRLQVLDPVLLQAGAGVKGEFEQRLKQVIDEVENSSTPIILFIDEVHT
LVGAGGTAGTGDAANMLKPALARGRLRTIGATTWSEYKKYIEKDPALSRRFQAIQVAEPE
EDSAIEMLRSLVPALESHHGVLIEDAALQAAVRLSHRYIPARQLPDKAVSLLDTACARIA
MTLASDPVELEHCLRQLELLEMERQIAEREANLCLGDTQRPSQISERLAELRLKADVLQQ
RCAEERLRVQRILQLREVLSTSDIEPGERADRQFELTSLQAAEHRNEPVLLRSQVDPQTV
ATVISDWTGIPLGNMVQDEAEAVLTLSDTLRRRIIGQDAGLEAISRRVRTARARLDDPNK
PIGVFLLCGPSGVGKTETALALAESLYGGEQNLITLNMSEFQESHTVSTLKGSPPGYVGY
GEGGVLTEAVRRRPYSVVLLDEIEKAHNDVHELFLQVFDKGWMEDGEGRYIDFKSTIILL
TTNVGSERIVGLCEDPELTPATEALANAIYPDLRKVFPAELLGRLVLVPYLPLDGASLGR
IIRLQLARIGKRLQQQHGLEFDYTEACIELIAQRCTRLEAGGRMIEAILSHDVLPELSQL
VLTSKADERQRTIHLTAEAGNFHFGLGIPKQPYAMESDELIPSEVSI
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatcagtcgtctttccctattcggccgcctgagcccactactgtatcgctcg
ctggaaggtgctacggccttctgcaagctaaggggcaacccctatgtggagttgtcacac
tggttgcagcaagtgctggaagagcccggtagcgatctgcgctgcgctatcacccacttc
gacctcgacgaagggcgtctgcgtctagacctgcagcacgcgctggatgccctgccccga
ggcgccagttcggtttccgactttgccgaaatgatcgacctgagcgtcgagcgaagctgg
gtctattgcagtctgctcttcgaggctccgcgtgtgcgcagcagccacctgctgctcgcc
tgccttcgccagagtagcctgcgttcggtgctgctgggcatctccgggcaattcggcaag
atccttccggacctgcttatccagtcacatgactcgatcttcgccaactcgccagagcag
ccggccccggatgatctgccgcaagtgccgtccggcaccgaggctggaagtgccctgcaa
cgttttgccgtcgacctgaccgagcgtgctcgacgcggcgaactggaccctgtttacgga
cgtgatgaagaagtccggcagatgatcgacatcctcatgcgccggcgacagaacaatccc
ttgctcacaggggaggccggtgtcggcaagacggccatcgtcgaaggcctggccatacga
ctggcccggggggacgtaccgaaaaaacttcaaggggtgcgcctgcaggtactcgacccg
gtattgctgcaggccggggccggtgtaaaaggcgaatttgagcaacgcctgaagcaggta
atcgacgaagtagagaacagttccaccccgatcattctgttcatcgacgaggtacacacc
cttgtcggtgccggtggcactgcaggcaccggcgatgccgccaatatgctcaagccggcg
ctggcccgtgggcgcttgcgcaccatcggcgcgacaacctggagcgagtacaagaagtac
atcgagaaggatccagcactgtcgcgtcgcttccaggccatccaggtcgcggagcccgaa
gaagactctgccatcgaaatgttgcgcagcctggtcccggcgctggaaagtcaccacggc
gtactgattgaggacgccgcgctgcaggctgccgtacgtctatcgcaccgctatatcccg
gcccggcaattgccggataaagcagtcagccttctggataccgcctgcgcgcggattgcc
atgaccctggccagcgatccggtagagttggagcactgcctgcgccagctcgaactcttg
gagatggagcggcagattgccgaacgtgaagcgaacttgtgcctgggcgacactcagcgc
ccctcgcagatctccgagcgactcgctgaactgcgcctgaaagccgacgtcctgcaacag
cgctgcgcagaggagcggctccgcgtacagcgaattctccaattgcgcgaagttctgagc
acgtccgatatcgagccaggcgagcgcgccgatcgacaattcgagttgaccagcctgcaa
gccgcagagcaccgcaacgagccagtcctgctgcgttcccaggtcgacccacagacagta
gctacggtgatctccgactggaccggcatccccctgggcaacatggtccaggacgaagcc
gaagccgtcctgaccctgtcggacactctgcgccgacgcatcatcggccaggacgccggc
ctcgaagccatcagccggcgcgtacgcaccgcacgcgcacgtctggacgatccgaacaaa
ccgatcggcgtattcctcctctgcggtccttccggcgtcggcaagaccgagacggcattg
gcgctggccgagtccttgtatggtggcgagcagaacctgatcaccctgaacatgagtgag
tttcaggaatcccatacagtctccacgctgaagggttcgccacccggctacgtcggctac
ggcgagggcggcgtgctgaccgaggcggtgcgccggcgcccgtacagcgtggtgctgctc
gatgaaatcgagaaagcccataacgacgttcacgagctgttcctgcaggtcttcgacaaa
ggctggatggaagacggcgaaggtcggtatatcgacttcaagagcaccatcatcctgctc
accaccaacgtcggcagcgagcgcatcgtcggcctctgcgaagaccccgagctgacaccc
gccaccgaggcactggccaatgccatctacccggacctgcgcaaggtcttccctgctgag
ttgcttggccgcctggttctggtgccttacctgccgctcgacggcgcgagccttgggcgg
atcatccgcctgcaactggcgcgcatcggcaagcgcctgcaacagcagcacggcctggag
ttcgactacaccgaagcctgcatcgagctgatcgcccagcgctgcacgcgcctcgaagca
gggggccggatgatcgaggcaatcctcagccatgacgtgctgcctgaactcagccagctc
gtgctgaccagcaaagcggacgaaagacagcgaaccatccacctcaccgccgaggccgga
aattttcatttcggcctcggaataccgaagcagccttacgccatggaatccgatgaattg
attccatcagaggtatcgatatga
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