Pseudomonas nitroreducens: G5B91_05215
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Entry
G5B91_05215 CDS
T08828
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pnt
Pseudomonas nitroreducens
Pathway
pnt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G5B91_05215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pnt02022
]
G5B91_05215
02035 Bacterial motility proteins [BR:
pnt02035
]
G5B91_05215
Two-component system [BR:
pnt02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
G5B91_05215
Bacterial motility proteins [BR:
pnt02035
]
Pilus system
Twitching motility proteins
G5B91_05215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_50
AAA_5
AAA_16
HTH_30
AAA_22
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
QIE85698
UniProt:
A0A6G6IRG3
LinkDB
All DBs
Position
complement(1084210..1085547)
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AA seq
445 aa
AA seq
DB search
MSRQKALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARDFLAREPFDFCLTDMRLPDG
TGLDLVQYIQQRHPQMPVAMITAFGSLDTAVQALKAGAFDFLTKPVDLARLRELVNSALR
LRSPEAEEAPVDSRLLGDSPPMRTLRNQVAKLARSQAPVYISGESGSGKELVARLIHEQG
PREVQTFVPVNCGAIPSELMESEFFGHKKGSFTGAVEDKLGLFQAANGGTLFLDEVADLP
LPMQVKLLRVIQEKAVRAVGGQQEVAVDVRILCATHKDLAAEVAAGRFRQDLYYRLNVIE
LRVPPLRERREDIPLLTDRVLKRLAGDSGLTAASVSADALEKLKSYRFPGNVRELENMLE
RAYTLCEDDVIQPHDLRLAETGTADGGGEASLAQIDNLEDYLEDIERKLIMQALEETRWN
RTAAAQRLGLTFRSMRYRLKKLGID
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtcaaaaagccctgatcgtcgacgacgaacccgacattcgcgagctgctggaa
atcaccctcggccgcatgaagctggacacccgcagcgcccgcaacgtcaaggaagcccgc
gacttcctggcccgcgagccgttcgacttctgcctcaccgacatgcgcctgcccgacggc
accggcctggacctggtgcaatacatccagcaacgccatcctcagatgccggtggcgatg
atcaccgccttcggcagcctggataccgcggtgcaggcgctcaaggccggcgccttcgac
ttcctgaccaagcctgtggacctcgcccgtctgcgcgagctggtgaactccgccctgcgc
ctgcgctcgccggaagccgaggaagcgccggtggacagccgcctgctcggcgactcccca
cccatgcgcaccctgcgcaaccaggtggccaagctggcccgcagccaggcgccggtttat
atcagcggcgaatccggcagcggcaaggaactggtggcccggctgatccacgagcagggc
ccgcgggaggtacagaccttcgtgccggtcaactgcggcgccatcccgtcggagctgatg
gaaagcgagttcttcggccacaagaaaggcagcttcaccggcgccgtggaagacaagctg
ggcctgttccaggcagcgaacggcggcaccctgttcctcgacgaggtggccgacctgccg
ctgccgatgcaggtcaagctgctgcgcgtcatccaggaaaaggccgtgcgcgccgtgggg
ggccagcaggaggtcgcggtggacgtgcgcatcctctgtgcgacgcacaaggacctggcc
gccgaagtggccgccgggcgcttccgtcaggacctctactatcgcctgaacgtcatcgag
ttgcgggttccgcccctgcgcgagcgtcgtgaagacatcccgctgctgaccgatcgcgta
ctcaagcgcctggccggcgacagcgggctgacagccgcctcggtcagcgccgacgccctg
gagaagctcaagagctaccgcttcccgggcaacgtgcgggagctggagaacatgctcgag
cgcgcctacacgctttgcgaagacgacgttatccagccccacgacctgcgtctggccgag
acaggtaccgcggacggcggtggcgaagccagcctggcgcagatcgacaacctcgaggac
tacctcgaggacatcgaacgcaagctgatcatgcaggccctggaagagacgcgctggaac
cgcaccgcggcggcgcagcgcctgggcctgaccttccgctccatgcgctaccgcctgaag
aagctggggatcgactga
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