Pseudomonas nitroreducens: G5B91_08770
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Entry
G5B91_08770 CDS
T08828
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pnt
Pseudomonas nitroreducens
Pathway
pnt03410
Base excision repair
pnt03430
Mismatch repair
pnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G5B91_08770 (recJ)
03430 Mismatch repair
G5B91_08770 (recJ)
03440 Homologous recombination
G5B91_08770 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnt03400
]
G5B91_08770 (recJ)
DNA repair and recombination proteins [BR:
pnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
G5B91_08770 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G5B91_08770 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G5B91_08770 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QIE86357
UniProt:
A0A6G6ITR1
LinkDB
All DBs
Position
1856280..1857995
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AA seq
571 aa
AA seq
DB search
MRIESRPLPPTLPDLGDLPPLLTRLYAARGVQSAAELDKGLARLIPYQQLKGVDAAVELL
VDALEKGQRILYVGDFDADGATASSVGVLALRMLGAAWVDYLVPNRFEYGYGLTPEIVAV
ALEKRPELLVTVDNGISSIDGVAAAKAAGLRVLVTDHHLPGPELPAADAIVNPNQPGCDF
PSKAMAGVGVIFYVMLALRARLRERGWFAARGIAEPNLAELLDLVSLGSVADVVPLDANN
RILVHQGLARIRAGRARPGLRALLEVAGRDCRRITSTDLGFILGPRLNAAGRLDDMSLGI
ELLLCEDESVARDMAVQLDQLNQDRKAIEQGMQREALAQLKELPVEEMPFGLCLFDPEWH
QGVIGILASRLKERYHRPTIAFADAGDGTLKGSARSVPGFHIRDALDAVAARHPGLISKF
GGHAMAAGLSLPQENFGAFAAAFDAEVRRQLDEEDLTGRLLSDGQLGAEEFHLELARALR
QAGPWGQHFPEPLFHGIFQVVQQRVVGERHLKLVLKTECGSLQLDAIAFNIDREIWPNPT
VRWAEVAYKLDVNEFRGNETVQLMVAHIAPR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgaatcccgccccctcccgccaaccctgcccgacctgggcgacctgccgccg
ctgctgacccgtctctacgccgcccgcggcgtgcagagcgcggccgagctggacaagggc
ctggcacggttgatcccgtaccagcagctcaagggcgtggacgcggcggtggagctgctg
gtcgatgcgctggaaaagggtcagcggattctctacgtcggcgacttcgatgccgatggc
gccaccgccagcagcgttggcgtgctggcgctgcgcatgctcggtgcggcctgggtcgat
tacctggtgcccaaccgcttcgagtacggctacggcctgacgccggaaatcgtcgccgtg
gcgctggagaagcgcccggagctgctggtgaccgtggacaacggcatctccagcatcgac
ggcgtcgccgccgccaaggccgccggcctgcgcgtgctggtcaccgaccaccacctgccg
gggccggaactgcccgccgccgacgccatcgtcaacccgaatcagcccggctgcgacttc
cccagcaaggccatggccggtgtcggcgtgatcttctacgtgatgctcgccctgcgtgcc
cgcctgcgtgaacgaggctggttcgctgcgcgcggcatcgccgagccgaacctggccgaa
ctgctcgacctggtgtccctgggcagcgtcgccgacgtggtaccgctggacgccaacaac
cgcatcctggtccatcagggcctcgcgcgtatccgtgccggccgcgcccgcccgggcctg
cgtgcgctgctggaagtggccgggcgcgattgccggcgcatcacctccacggacctcggc
ttcatcctcggcccgcggctgaacgctgccgggcgcctggacgacatgtccctgggcatc
gaactgctgctctgcgaagacgaaagcgtcgcccgcgacatggcggtgcagctcgaccag
ctcaatcaggatcgcaaggccatcgagcagggcatgcagcgcgaggcgctggcccagctc
aaggaactgccggtggaggagatgcccttcggcctgtgcctgttcgacccggaatggcac
cagggcgtgatcggcatccttgcttcgcgcctgaaggagcgttaccaccggccaaccatt
gccttcgccgatgccggcgacggcacgctcaagggctcggcgcgttcggtgccgggcttc
catatccgcgatgcgctggacgccgtggcggcgcgccacccagggctgatcagcaagttc
ggtggtcacgccatggccgccggcctgtcgctgccgcaggaaaatttcggcgccttcgcc
gctgccttcgacgccgaagtgcgccgtcagctggatgaagaagacctcaccgggcgcctg
ctctccgacggccagctgggcgccgaggagttccacctggagctggcccgcgcgctgcgc
caggccggcccctggggccagcatttccccgagccgctgttccacggcatcttccaggtc
gtccagcagcgcgtggttggcgagcggcacctgaagctggtgctcaagaccgagtgcggc
tcgctgcagctggacgccatcgccttcaacatcgaccgcgaaatctggcccaaccccacc
gtgcgctgggcggaagtggcctacaagctcgacgtcaacgagttccgtggcaacgagacg
gtgcagctgatggtggcgcatattgcgccgcgctga
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