Pseudomonas nitroreducens: G5B91_09390
Help
Entry
G5B91_09390 CDS
T08828
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pnt
Pseudomonas nitroreducens
Pathway
pnt03030
DNA replication
pnt03430
Mismatch repair
pnt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G5B91_09390 (dnaE)
03430 Mismatch repair
G5B91_09390 (dnaE)
03440 Homologous recombination
G5B91_09390 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnt03032
]
G5B91_09390 (dnaE)
03400 DNA repair and recombination proteins [BR:
pnt03400
]
G5B91_09390 (dnaE)
Enzymes [BR:
pnt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G5B91_09390 (dnaE)
DNA replication proteins [BR:
pnt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G5B91_09390 (dnaE)
DNA repair and recombination proteins [BR:
pnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G5B91_09390 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QIE86475
UniProt:
A0A6G6ITL4
LinkDB
All DBs
Position
1996151..1999681
Genome browser
AA seq
1176 aa
AA seq
DB search
MTATFVHLRLHTEFSLVDGLVRVKPLIKAVGGAGMPAVAVTDLSNMCSLVKFYKTAMGGG
IKPICGADIWLANRDEDGPLTRLTLLAMNAKGYRNLTELISRGWQEGQRNGEIIIERQWV
KEAAEGLIALSGSKEGEIGLALLEGDDALADSLLAEWLEVFPERFYLDIQRTNRVNDEEH
VHAAVALAERSGAPLVATNDVRFIKQEDFEAHETRVCIGEGRALDDPRRSRHYSDQQYLK
SPAEMAELFSDIPEALENSVEIAKRCNIEVQLGKYFLPNFPIPYDDMDINQYLRHVSYEG
LEERLAVLWPKETTPNYEEKRQIYVDRLEFELGTIIQMGFPGYFLIVMDFIKWAKNNGVP
VGPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMEGRDRVIDY
VAGAYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADKLSKMIPFEVGMTLEKAFEQ
EEMLRDFLKSDEEAQEIWDMALKLEGVTRGTGKHAGGVVIAPTKLTDFAPIACDEEGAGL
VTQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEIIHRIQKKNGDPNLVDIDRIPLDDKKT
YDLLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKH
GREEISYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYSLGGADMLRRAMGKKK
PEEMAKQRGGFIEGCAGNGIDANLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKT
HWKAPFMAAVLTADMQNTDKVVTLIEECRHMKLRILAPDVNNSEFRFTVDEDDQIVYGLG
AIKGVGEGPVEAITECRNEGGPFKNLFDFCDRIDLKRVNKRTLEALIRAGALDRLGPHFF
EEQKAYHAHVDINRAVLLASMEEAVKAAEQTSRSHDSGHMDLFGGVFAEPEADVYANHRK
VKELNLKERLKGEKDTLGLYLTGHPIDEYEGEVRRFARQRIVELKPARDTQTVAGLIVNL
RVMKNKRGDKMGFVTLDDRSGRIEASLFAEAFAANQALLQTDALVVIEGEVSQDDFSGGL
RLRAKRVMGLEEARTSLAESLRVRVHADALKGDRLRWLADLCTRHRGSCPVTVDYSGESA
RALLQFGEQWRIDPADNLIQALRDQFGRDNVFLNYR
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaccttcgttcacctgcgtctgcacaccgaattctccctggtcgacggcctg
gtgcgggtcaagccgctgatcaaggcggttggcggggcgggtatgccggcggtggcggtg
accgacctgagcaacatgtgctcgctggtaaagttctacaagacggccatgggcggcggc
atcaagccgatttgcggcgccgacatctggctggccaaccgcgacgaggatggcccgctg
acccgcctgaccctgctggcgatgaacgccaagggctatcgcaacctcaccgagctgatt
tcccgcggctggcaggaaggccagcgcaacggcgagatcatcatcgagcgccagtgggta
aaggaggccgccgagggcctgatcgcgctgtccggctccaaggaaggcgagatcggcttg
gccctgctggaaggcgacgatgccctggccgactcgctgcttgccgagtggctggaagtg
ttcccggagcgcttttacctcgacatccagcgcaccaaccgcgtcaacgacgaagaacac
gtgcatgccgccgtggccctggctgagcgcagcggcgcgccactggtggcgaccaacgac
gtgcgcttcatcaagcaggaagacttcgaggcccatgagacccgcgtgtgcatcggtgaa
ggccgtgcgctggacgatccgcgccgctcgcgtcactactctgaccagcagtatctgaag
agtccggcagaaatggccgagctgttcagcgatatccccgaagcgctggaaaactccgtc
gagatcgccaagcgctgcaatatcgaggtgcaactgggcaagtacttcctgcccaacttc
ccgatcccctacgacgacatggatatcaaccaatatctgcgccatgtctcctacgaaggc
ctggaggagcgcctggcggtgctgtggccgaaggaaaccacgccgaactacgaagagaag
cggcagatctacgttgaccgtctggagttcgagttgggcaccattatccagatggggttc
cccggctacttcctgatcgtgatggacttcatcaagtgggccaagaacaacggcgtgcct
gtcggccccggccggggttcgggggccggttcgctggtcgcctacgtgctgaagatcacc
gacctcgatccgctggcctacgacctgctgttcgagcgtttcttgaaccccgaacgtatt
tccatgcccgacttcgatgtcgacttctgcatggaaggccgcgaccgggtgatcgactac
gtggccggcgcctacggccgcaatgcggtcagccagatcattaccttcggctccatggcc
gcgaaggcggtggtgcgtgacgtggcgcgggtgcagggaaaatcctacggcctggccgat
aagctgtcgaagatgattcccttcgaagtgggcatgacgctggagaaggccttcgaacag
gaggaaatgctccgcgacttcctcaagtccgacgaggaagcccaggaaatctgggacatg
gcgctcaagctggaaggtgtcacccgtggtaccggcaagcacgccggtggcgtggtgatc
gcgccgaccaagctgaccgacttcgctcccatcgcctgtgacgaggagggcgccggcctg
gtgacccagttcgacaaggacgatgtggaagctgccggcctggtgaagttcgacttcctc
ggcctgcgcaccctgaccatcatcaaatgggcgatggagatcatccatcgcatccagaag
aagaacggcgacccgaatctggtcgacatcgaccgcattccgctggacgacaagaagacc
tacgacctgttgcagaaggctgaaaccaccgcggtcttccagcttgaatcgcgtggcatg
aaggagctgatcaagaagctcaagccggactgtctggaagacctcatcgcactggtggcg
ctgttccgtcccggcccgctgcagtcgggcatggtggacgacttcatcaaccgtaagcat
ggtcgcgaagagatttcctacccacacccggattaccagtacgctggcctggaaccggtg
ctcaagccgacctacggcatcatcctgtaccaggaacaggtgatgcagatcgcccaggtg
atggcgggctacagcctcggtggtgcggacatgctgcgccgcgccatgggcaagaagaag
cccgaggaaatggccaagcagcgcggcggcttcatcgaaggttgtgccggcaacggcatc
gacgccaacctcgcgggcaacatcttcgatctggtggaaaagttcgccggctacggcttc
aacaagtcccactcggccgcctacggcctggtgtcgtaccagaccgcctggctgaagacc
cactggaaagccccgttcatggctgcggtactgaccgcggatatgcagaacaccgacaag
gtggtgacgctcatcgaagagtgccgccacatgaagctgcgcattctcgcgccggacgtg
aacaactccgagttccgcttcaccgtggatgaggacgaccagatcgtctacggcctgggc
gcgatcaagggcgtcggtgaaggcccggtggaagccatcaccgagtgccgcaacgaaggc
ggcccgttcaagaacctgttcgacttctgcgatcgcatcgatctcaagcgcgtcaacaag
cggaccctggaagcgctgatccgcgccggcgcgctggaccgcctcggcccgcacttcttt
gaggagcagaaggcctaccacgcccacgtcgacatcaaccgcgccgtgctgctggcctcc
atggaagaagccgtcaaggccgccgagcagacctcgcgcagccatgacagcggccacatg
gacctgtttggcggcgtcttcgccgagcccgaggcggacgtttacgccaaccatcgcaag
gtcaaggagctcaacctcaaggagcgcctgaaaggcgagaaggacaccctcggcctgtac
ctgaccggccatcccatcgacgagtacgaaggcgaggtgcgacgttttgcccgccagcgc
atcgtcgagctcaagcccgcgcgtgacactcagactgtcgccggcctgatcgtcaacctg
cgggtaatgaagaacaagcgcggcgacaagatgggcttcgtgaccctggacgaccgctcc
ggccgcatcgaagcctcgttgttcgccgaagccttcgccgccaaccaggcgctgctgcag
accgatgcgctggtggtgatcgagggtgaagtcagtcaggacgatttctccggcggcctg
cgcctgcgcgccaagcgcgtcatgggcctggaagaggcccgcacgtcgctggccgagagc
cttcgggtgcgcgtgcatgccgatgcgctcaagggcgaccgcctgcgctggctggccgat
ctgtgcacccgccacaggggcagttgcccggtgaccgtcgactacagtggcgagtcggca
cgcgcgctgctgcagttcggcgagcagtggcggatcgacccggcagacaacctgattcaa
gcgctgcgtgaccagttcggccgcgacaacgtcttcctgaactaccgctag
DBGET
integrated database retrieval system
