Pseudomonas nitroreducens: G5B91_12605
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Entry
G5B91_12605 CDS
T08828
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pnt
Pseudomonas nitroreducens
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnt01011
]
G5B91_12605
Enzymes [BR:
pnt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
G5B91_12605
Peptidoglycan biosynthesis and degradation proteins [BR:
pnt01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
G5B91_12605
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LPAM_MltD
LysM3_LYK4_5
LysM_RLK
NMB0315_dom_I
LysM1_NFP_LYK
LysM_OapA
HRDC
PASTA
Motif
Other DBs
NCBI-ProteinID:
QIE87061
UniProt:
A0A6G6IXU9
LinkDB
All DBs
Position
complement(2625554..2627176)
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AA seq
540 aa
AA seq
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MPPKTRNTSDLDALARAIRVSIVLLAAGLAGCQSTSQVASNGPIRNASRAVDVQFNPAWT
ASQNDIWERMRGGFQLQDQLNTNPRIERQRLWFMSNQSFLENASERGAPYMHYVVERLEE
RDMPLELALLPMIESSYNPMAVSRAQAVGLWQFIPSTGTHFNLRQTNFYDGRRDITASTN
AALTYLNRLHDMFNGDWLLALAAYNAGEGTVSRAIERNERLGLPTDYWNLPLPQETQDYV
PKLLALSQLVNAPTIYGINLSPIANQPYFTSIRVKPGLDLSQVAAVADLDQDELQQLNPA
FKRGVTLDGPHHLLVPLNKADSLKAGVANLQPVELKPLAATVATSSGSRYRVRKGDSLHS
IAQRYRLSVAELKAANRLSANRLRNGQTLVIPGQPGRPVIEPESPRQLAQVESSKTTASA
RVATRSYTVKNGDTLWQIAKKNGVDVADLKRWNGLDSHGVKPGQTLKLQSAAATQLAANS
KAKAKQDTATYYKVKQGDSMYLIAKRFNVEMQHIKRWNPRSGKALKPGQTITLYLDTASR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaagaccagaaatacctccgatctagacgcattggcacgagccatccgagtc
tctattgtccttctcgccgcgggcctggctgggtgccagtcgaccagccaagtagccagc
aacggcccgatccgcaacgcatcccgcgccgtcgatgtgcagttcaatccggcctggacg
gcgtcccagaacgatatctgggaacgcatgcgtggcggcttccagctgcaggaccagctc
aacaccaacccgcgtatcgagcgtcagcgcctgtggttcatgagcaaccagtcgttcctg
gagaacgccagcgagcgcggcgcaccgtatatgcactacgtcgtcgagcgcctggaagag
cgcgacatgccgctggagctcgcgctgctgccgatgatcgagagctcgtacaacccgatg
gccgtgtcgcgcgcccaggccgtgggcctgtggcagttcatccccagtaccggcacgcac
ttcaacctgcgccagaccaacttctacgacggccgccgcgatatcaccgcgtcgaccaac
gccgcgctcacctacctgaaccgtctgcatgacatgttcaatggcgactggctgctcgcc
ctggccgcctacaacgccggcgaaggtaccgtcagccgggcgatcgagcgcaacgagcgc
ctcggcctgcccaccgactactggaacctgccgttgccgcaggaaacccaggactacgtg
cccaagctgctggccctgtcgcaactggtgaatgccccgaccatctacggcatcaacctc
agccccatcgccaaccagccctacttcacctcgatccgcgtcaagccgggcctggatctc
tcccaggtcgccgccgtcgccgacctggaccaggacgaactgcagcagctcaacccagcc
ttcaagcgcggtgtgactctcgacggcccgcaccacctactggtgccgctgaacaaggcc
gactcgctcaaggctggcgtcgccaacttgcagcctgtcgaactcaagccgctggcggca
accgtggcaaccagctccggtagccgctaccgggtacgcaagggcgacagcctgcacagc
atcgcccagcgctaccgcctgagcgtcgccgaactcaaggcagccaaccgcctgagcgcc
aaccgcctgcgcaacggccagaccctggtgatccccggccagccgggccgcccggtcatc
gagccggaaagcccgcgccagttggctcaggtggaaagctcgaagaccaccgccagcgcg
cgtgtcgccacccgcagctacaccgtgaagaatggcgacacactctggcagatcgccaag
aagaacggcgtcgacgtggccgacctcaagcgctggaacggactggacagccacggcgta
aaacccggccagaccctcaagctgcagagcgccgccgccacccaactggcggctaacagc
aaagccaaggccaagcaggacaccgcgacctactacaaggtcaagcaaggcgactcgatg
tacctgatcgccaagcgcttcaacgtcgagatgcagcacatcaagcgctggaacccacgc
agtggcaaggctcttaagcctggccagaccatcacgctgtacctcgacaccgcgagccgc
tga
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