Pseudomonas nitroreducens: G5B91_13305
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Entry
G5B91_13305 CDS
T08828
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pnt
Pseudomonas nitroreducens
Pathway
pnt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G5B91_13305 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnt03400
]
G5B91_13305 (xthA)
Enzymes [BR:
pnt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
G5B91_13305 (xthA)
DNA repair and recombination proteins [BR:
pnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
G5B91_13305 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
QIE87189
LinkDB
All DBs
Position
complement(2789277..2790089)
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AA seq
270 aa
AA seq
DB search
MKIVSFNINGLRARPHQLQAIIERHQPDVIGLQETKVADEQFPREEIEALGYHVHYHGQK
GHYGVALLSRQEPLELQRGFPNDGEESQRRFIWGTFKDAQGQLITVMNGYFPQGESRDHP
VKFPAKQRFYADLQDLLETRFQPDQQLIVMGDINISPEDCDIGIGEENRKRWLKTGKCSF
LPEEREWLARLKGWGLVDSFRLQNPSVDDRFSWFDYRSRGFEDTPKRGLRIDVILASEAL
RGRIADTGVDYDIRAMEKPSDHAPIWLQLK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgtctctttcaatatcaacggtttgcgcgcacgtccccaccagctccaggcg
atcatcgaacgccaccagccggacgtgatcggcctgcaggaaaccaaggtcgccgacgag
cagttcccccgcgaggaaatcgaagccctcggctaccacgtgcactaccacgggcagaaa
ggccactacggcgtcgccctgctctcccgtcaggagccgctggaactgcagcgcggcttc
cccaacgacggcgaggaatcccagcgccgcttcatctggggcaccttcaaggacgcccag
ggtcagttgatcaccgtgatgaacggctacttcccgcagggcgagagccgtgatcatccg
gtgaagttcccggccaagcagcgcttctacgccgacctccaggacctgctggaaacccgc
ttccagcccgaccagcaactgatcgtgatgggcgatatcaacatctcgccggaagactgc
gacatcggtatcggcgaagagaatcgcaagcgctggctgaagaccggcaagtgcagcttc
ctgccggaagagcgcgaatggttggcacgcctcaagggctggggtctggtggacagtttc
cgcctgcagaacccgagcgtggatgaccgcttcagttggttcgactaccgcagtcgcggc
ttcgaggacacccccaagcgcggcctgcgcattgacgtcatcctcgcctccgaggccctg
cgcgggcgcattgccgataccggtgtggactacgacatccgcgctatggaaaagccgtcc
gaccatgcgccgatctggctgcagctgaagtga
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