Pseudomonas nitroreducens: G5B91_18885
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Entry
G5B91_18885 CDS
T08828
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pnt
Pseudomonas nitroreducens
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnt03032
]
G5B91_18885
03400 DNA repair and recombination proteins [BR:
pnt03400
]
G5B91_18885
Enzymes [BR:
pnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G5B91_18885
DNA replication proteins [BR:
pnt03032
]
Prokaryotic type
DNA Topoisomerases
G5B91_18885
DNA repair and recombination proteins [BR:
pnt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G5B91_18885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
QIE88225
UniProt:
A0A6G6IYK7
LinkDB
All DBs
Position
3962657..3963673
Genome browser
AA seq
338 aa
AA seq
DB search
MSTPPELLDLPPDLHYVDDSLPGISRRRLRGRFAYFDPGGERIRVEAEIERIDRLAIPPA
YIDVWICIDPLGHLQATGRDVRGRKQYRYHPRWTEVRDSAKYERLLRFGESLPALRRRIE
RDLALPGLGAEKVMATVVELLDRTLIRIGNERYRKENRSFGLTTLNNRHVEVQGTRIRFA
FRGKSGIRHSVDIEHPRLARILRRCLELPGQQLFQYLDADRQRHMIDSRDINAYLREHAG
EEFTAKDYRTWAGTTLALEHCRRTHWEDEKSANRQLKSIIQQVADELGNTPAICRKCYVH
PRVIQAFLAGELSGLAKARKRKNLSAEEATLLAFLQSD
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaccgccggagctgctggacctgccccccgacctgcactacgtcgacgacagc
ctgccgggcatcagccggcgtcgcctgcgcgggcgcttcgcctacttcgacccgggcggc
gaacgcattcgcgtcgaagcggagatcgagcggatcgaccgcctggcgatcccgccagcc
tatatcgatgtgtggatctgcatcgacccgctcggccacctgcaggcaaccggccgcgac
gtgcgcgggcgcaagcagtaccgttaccacccgcgctggaccgaggtccgcgacagcgcc
aagtacgagcgcctgctgcgcttcggggaaagcctgccagcgctgcgcaggcgtatagaa
cgggacctggcgctgcccggcctgggagcggaaaaggtcatggcgaccgtggtcgaactg
ctcgatcgcaccttgatccgcatcggcaacgaacgctaccgcaaggaaaatcgctccttc
ggcctcacgacgctgaacaaccgccatgtcgaagtccagggcacgcgcattcgcttcgcc
tttcgtggcaagagcggcatccgccacagcgtggacatcgaacacccgcgcctggcgcgc
atcctccggcgttgccttgagctgcccgggcaacagctgttccagtacctggacgcagac
cgccagcggcacatgatcgactcccgcgacatcaacgcctacctgcgcgagcacgccggc
gaggagttcaccgccaaggactaccgcacctgggctggcaccaccctggcccttgagcac
tgccgcaggacccactgggaagacgagaagagcgccaaccgccagctcaagtcgatcatc
cagcaggtggccgacgaactgggcaacactccggcgatctgccgcaaatgctacgtgcat
ccgcgggtgatacaggcctttcttgctggcgaactgagcggattagcgaaggcgcgcaag
cgcaagaacctcagcgccgaggaagctaccctgctggcttttctccagtccgactga
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