Pseudomonas nitroreducens: G5B91_19950
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Entry
G5B91_19950 CDS
T08828
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pnt
Pseudomonas nitroreducens
Pathway
pnt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G5B91_19950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnt03021
]
G5B91_19950
Transcription machinery [BR:
pnt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G5B91_19950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
DUF6031
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QIE88420
LinkDB
All DBs
Position
complement(4200565..4201074)
Genome browser
AA seq
169 aa
AA seq
DB search
MDSERAFERDVERLYLAHHGWLKGWLRRRLGEHADAEDLAHDTFVRVMRSRSAIADLRQP
LAYLATIANSLLINRWRRQAVERAYLEALAARPEAVAPSEEERLLLIEALVEVDELLHGL
APQVREIFLLSQLDGLTYPQIALRLELSVNQVQKAMSKAFAACYASRFE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgagcgggcattcgaacgggatgttgagcggctttaccttgcgcaccacggg
tggctgaagggctggctgcgccgccgcctgggcgagcacgccgatgcggaagacctggcc
catgacacctttgtgcgggtgatgcgctcgcgcagcgccatcgccgacctgcgccagccg
ctggcctacctcgccaccattgccaacagcctgctgatcaaccgctggcgccgtcaggcg
gtcgagcgggcctacctcgaagctctggccgcgcgtcccgaagcggtagcgccgtccgag
gaagaacgcctgctgctgatcgaggctttggtggaggtcgatgagctcctgcatggcctg
gcgccccaggtgcgggaaatcttcctgctgtcgcagctcgacggcctgacttacccgcag
atcgcgttgcgcctggaactgagcgtcaaccaggtgcagaaggcgatgagcaaggcattc
gccgcctgctacgcgagccggttcgagtga
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