Pseudomonas nitroreducens: G5B91_25050
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Entry
G5B91_25050 CDS
T08828
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pnt
Pseudomonas nitroreducens
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnt03021
]
G5B91_25050 (rapA)
Transcription machinery [BR:
pnt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
G5B91_25050 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
DUF6231
Motif
Other DBs
NCBI-ProteinID:
QIE89351
LinkDB
All DBs
Position
5236347..5239193
Genome browser
AA seq
948 aa
AA seq
DB search
MAQYQPGQRWISDSEAELGLGTILALDGRMLTVLYPATGDTRQYAERNAPLTRVRFAPGD
QITHFEGWKMTVREVDEIDGLLIYHGITAQNEPHTVPETQLSNFIQFRLASDRLFAGQID
PMSWFGLRYHTLEHRTRLLQSSLWGLGGARAQPIAHQLHIAREVADRMAPRVLLADEVGL
GKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLEVALFDRERFVESDAS
NPFEDTQLALVALEWLREDEKAQDALFAAEWDLLVVDEAHHLVWHPEQASPEYQLVEQLS
QVIPGVLLLTATPEQLGLDSHFARLRLLDPDRFHDLEAFRTESSQYRPVAEAVQELVDQG
TLSPTARQAIHGFLGSEGDELLASVEAGNEEARARLVRELLDRHGTGRVLFRNTRAAVQG
FPERQLHPYVLANPIEYMELPLGEHPDLYPEVSFQAQADDGDENNRWWRFDPRVEWLIDT
LKMLKQYKVLVICAHAETAMDLGDALRLKSGIPATVFHEGMSILERDRAAAYFADEEFGA
QVLVCSEIGSEGRNFQFAHHLVLFDLPAHPDQLEQRIGRLDRIGQKHTIQIHVPHLENSP
QERLFQWYHQALNAFLNTCPTGNALQHRFGPRLVELLDGGDDDAFEALLAEGTAAREALE
AEMHNGRDRLLELNSGGAGEGEALVAEIEEQDDQFALPIYMERLFDTYGIDSEDHSENAL
ILRPSEKMLDASFPLGDDEGVTVTYDRGQALAREDMQFLTWEHPMVQGGMDLVLSGSLGN
TSVALIKNKALKPGTVLLELLFVSEAVAPRKLQLGRFLPPVALRCLMDANGNDLSSRVSF
DTLNDQLESVPRASANKFVQAQRDVLAKQFSVAETKITPRHAERVELARQQLKATLDEEL
ARLTALKAVNPSVRDSELDALRKQRDDSLAMLDKASLRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtatcaacccggtcaacgctggatcagtgacagtgaagcggaactcggcctg
gggaccatcctggcgctggatggccgcatgctcacggtgctctatccggccaccggtgat
acccgccagtacgccgagcgcaatgcgccgctgacccgcgtgcgcttcgccccgggcgat
cagatcacccacttcgaaggctggaagatgaccgtccgcgaagtggacgagatcgacggc
ctgctgatctaccacggcatcaccgcgcagaacgagccgcacaccgtcccggaaacccag
ctgtcgaacttcatccagttccgcctggccagcgaccgcctgttcgccgggcagatcgac
ccgatgtcctggttcggcctgcgctaccacaccctggaacaccgcacccgcctgctgcag
tcctcgctgtggggcctgggcggcgcccgcgcgcaacccatcgcgcaccagctgcacatc
gcccgcgaagtcgccgaccgcatggcgccgcgcgtcctgctggccgacgaagtgggcctg
ggcaagaccatcgaagcgggcctggtgatccaccgccagctgctctccggccgcgccagc
cgcgtactgatcctggtaccggaaaacctgcagcaccagtggctggtggaaatgcgccgg
cgcttcaacctggaagtcgcgctgttcgaccgcgagcgcttcgtcgagagcgatgccagc
aatcccttcgaggacacccagttggccctggtggcgctggaatggctgcgcgaggacgag
aaggcccaggacgcgctgttcgctgccgaatgggacctgctggtggtcgacgaggcccac
cacctcgtgtggcacccggaacaggccagcccggaataccagttggtcgagcaactctcc
caggtcatccctggcgtgctgctgctcaccgcgaccccggaacagctcggcctggatagc
cacttcgcccgtctgcgcctgctcgatccggaccgcttccacgacctggaagccttccgc
accgaaagcagtcagtaccgcccggttgccgaagcggtacaggagcttgtcgaccagggc
accctctcccctaccgcgcgccaggccatccacggcttcctcggcagcgagggcgacgag
ctgctggccagcgtcgaggccggcaatgaagaggcccgcgcccgcctggtacgcgagctg
ctcgaccgccacggcaccggccgcgtgctgttccgtaatacccgcgccgccgtgcagggc
ttcccggaacgccaactgcatccttacgtactggccaacccgatcgagtacatggagctg
ccgctgggcgagcacccggacctctacccggaagtcagcttccaggcccaggccgacgac
ggcgacgagaacaaccgctggtggcgcttcgacccgcgcgtcgagtggctgatcgacacc
ctgaagatgctcaagcagtacaaggtgctggtgatctgcgcccatgccgagaccgccatg
gacctgggcgacgccctgcgcctgaagtccggcatcccggccaccgtgttccacgaaggc
atgagcatcctcgaacgcgaccgcgccgccgcctacttcgccgatgaagagttcggcgcc
caggtgctggtctgctcggaaatcggcagcgaaggccgcaacttccagttcgcccatcac
ctcgtgctgttcgacctgccggcccacccggaccagctggaacagcgcatcggccgcctg
gaccggatcggccagaagcacaccatccagatccacgtcccgcacctggaaaacagcccg
caggaacgcctgttccagtggtaccaccaggcgctgaacgccttcctcaacacctgcccc
accggcaacgccctgcagcaccgcttcggcccgcgcctggtggaactgctggacggcggc
gacgacgacgccttcgaggccctgctggccgaaggcaccgctgcccgcgaggcgctggaa
gccgagatgcacaacggccgcgaccgcctgctggagctcaactccggcggcgccggcgaa
ggcgaggcgctggtggcggagatcgaggaacaggacgaccagttcgccctgccgatctac
atggagcgcctgttcgacacctatggcatcgacagcgaggaccattccgagaacgccctg
atcctgcgccccagcgagaagatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtgaccgtcacctacgaccgcggccaggcgctggctcgcgaagacatgcagttcctcacc
tgggaacaccccatggtgcagggcggcatggacctggtgctgtccggctcgctgggcaat
acctcggtggcgctgatcaagaacaaggcactcaagcccggtaccgtgctgctggaactg
ctgttcgtcagcgaggccgtggcaccgcgcaagctgcagctcggccgcttcctgccgcca
gtggcgctgcgctgcctgatggacgccaacggcaacgacctgtcctcgcgcgtatccttc
gacaccctgaacgatcagctggaaagcgtgccgcgcgccagcgccaacaagttcgtgcag
gcccagcgcgacgtgctggcgaagcaattctccgtggccgagaccaagatcaccccgcgc
catgccgagcgcgtggagctggctcgccagcagttgaaagcgaccctggacgaagagctg
gcgcgcctgaccgcgctcaaggccgtcaaccccagcgtgcgtgacagcgagctggatgcc
ctgcgcaagcagcgtgacgacagcctggcgatgctggacaaggcctcgctgcgcctggag
gcgatccgcgtgctggtcgccggctga
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