Pseudomonas nitroreducens: G5B91_28110
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Entry
G5B91_28110 CDS
T08828
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pnt
Pseudomonas nitroreducens
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnt03016
]
G5B91_28110 (truB)
Enzymes [BR:
pnt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
G5B91_28110 (truB)
Transfer RNA biogenesis [BR:
pnt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G5B91_28110 (truB)
Prokaryotic type
G5B91_28110 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QIE89907
UniProt:
A0A6G6J3U5
LinkDB
All DBs
Position
complement(5880418..5881332)
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AA seq
304 aa
AA seq
DB search
MAQVKRIRRAVNGVLILDKPRGMSSNQALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYETVAQLGVTTTTGDAEGEVLEQREVTIGRDAIEAMLPRFRGDIE
QVPPMYSALKKDGQPLYKLARAGEVVEREARSVTIARLDLLAFESPCATLAVSCSKGTYI
RTLVEDLGRELGCGAHVAALRRTQAGPFQLNQSVTLEVLEKVHAEGGNEALDRFLLPVDA
GLEHWPLLQLSEHSAYYWLHGQPVRAPEMPKFGMLRVQDHEGRFIGIGEVVEDGRLAPRR
LIRS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtgaaacgcattcgccgtgcggtcaacggcgtgctgattctcgacaagccg
cgtggcatgagctccaaccaggccctgcagaaggtgcgctggctgctcaatgccgagaag
gccggccataccggcagcctcgacccgctggccaccggtgtcctgccgctgtgcttcggc
gaggcgaccaagttctcccagtacctgctcgatgccgacaagggctacgagaccgtcgcc
caactgggcgtgaccaccaccaccggtgatgccgagggtgaggtcctagagcagcgcgag
gtgaccattggtcgggacgccatcgaggccatgctgccacgcttccgtggcgacatagag
caggtgccgccgatgtactcggccctgaagaaggacggtcagccgttgtacaagctggct
cgtgcaggagaggtagtggagcgcgaggcgcgttctgttactattgcgcgcctggatttg
ctcgccttcgagtcgccctgtgcgacgctggccgtttcctgtagcaagggcacctatatc
cgcaccctggtcgaagacctcggccgcgaacttgggtgtggtgcacacgttgccgccctg
cgccggacccaggccggacctttccagctgaaccagtcggtgacgttggaggtgctcgag
aaagtccatgccgagggcggcaacgaagccctcgaccgtttcctgctgccggtggatgcc
ggcctggaacactggccgctgttgcagctctccgagcacagcgcctattactggctgcat
ggccagccagtacgcgctcccgaaatgccgaagttcggcatgctgcgggtgcaggatcac
gaaggtcgcttcatcggcatcggtgaagtggtcgaagacgggcgcctggcgccgcgtcga
ctgattcggtcgtaa
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