Pseudomonas nitroreducens: G5B91_30640
Help
Entry
G5B91_30640 CDS
T08828
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pnt
Pseudomonas nitroreducens
Pathway
pnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5B91_30640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnt03019
]
G5B91_30640
03400 DNA repair and recombination proteins [BR:
pnt03400
]
G5B91_30640
Enzymes [BR:
pnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5B91_30640
Messenger RNA biogenesis [BR:
pnt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G5B91_30640
DNA repair and recombination proteins [BR:
pnt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G5B91_30640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
AAA_22
MarR_2
RepB
HTH_32
SNF2-rel_dom
NSUN5_fdxn-like
Motif
Other DBs
NCBI-ProteinID:
QIE90374
UniProt:
A0A6G6J557
LinkDB
All DBs
Position
complement(6445592..6447517)
Genome browser
AA seq
641 aa
AA seq
DB search
MHDTLERVFGFRQFRPGQEVAVSAVLAGRSAAAIFPTGSGKSLCYQLPALLLPHLTLVVS
PLLALMQDQLAFLARHGIAAASIDSAQSREQTAQTMARARSGELKVLMISVERLKNERFR
HFISEVPISLLVVDEAHCISEWGHNFRPDYLKLPDYQKQFRIPQVLLLTATATPAVIADM
RSKFAIAESDVVTTGFYRANLDLQVEPISSAARRARLVEWLRERPGRPAIVYVTQQKTAE
EIAAHLAERGIPACAYHAGMEHPERETIQRRFMEGRLNCIVATIAFGMGIDKSDIRQVVH
YDLPKSLENYSQEIGRAGRDGQRSECLVLANRDSLNVLENFVYGDTPEREGIRSVLEDIR
QAPNGQWETMLVPLSDQSNIRQLPLKTLLVQLELRGIIAPRFAYFAEYRYKLLIDSSALL
SHFEGERRQFVEAILTTSARARTWATLDFDTLYSRHGAERSRVVKALDYFQERGWVELES
KQMTEVYSVRDASFAVDQLSEELHGYFKRHEESEIARIGAMLDLLGSSECLSWRLARYFG
DQQAPRQCGHCSVCAGHVARLPEPPALPALDGQSLHNRCDAFLEKYRSARGTAPSTDCIT
RFLCGISVPAFTRMRARGLPGYATLEDYPYAQVRDWVQAQL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacaccctcgaacgcgtcttcggtttccgccagttccgccccggccaggaggtg
gcggtcagcgcagtgctggccgggcgctcggctgccgcgatcttccccaccggctcgggc
aagtcgttgtgctaccagttgcctgcgctactgctaccgcacctgacgctggtggtctcg
ccgctgctggcgctgatgcaggaccagctcgccttcctcgcccgccacggcatcgccgcc
gcgagcatcgattcggcgcagagccgcgagcagaccgcgcagaccatggcccgcgcgcgt
agcggcgagctgaaggtactgatgatttcggtcgaacgcctgaagaacgagcgcttccgc
cacttcatcagcgaggtgccgatttccctgctggtcgtggacgaggcgcactgtatctcc
gaatggggccacaacttccgccccgactacctgaagttgccggactatcagaagcagttc
cgcattccccaggtgctgctgctcaccgccacggcgacgcccgcggtgatcgccgacatg
cgcagcaagttcgccatcgccgagagcgacgtggtcaccaccggtttctaccgagccaac
ctcgacctgcaggtagagccgatctccagcgccgctcgccgtgcccggctggtggagtgg
ctgcgcgagcgtccgggcaggccggccatcgtctacgtcacccagcagaagaccgccgag
gagatcgccgcgcatctggccgagcgcggtattcccgcctgtgcctaccacgccgggatg
gaacacccggagcgcgagactatccagcgccgcttcatggagggccggctgaactgcatc
gtcgccaccatcgccttcggcatgggcatcgacaagagcgacatccgccaggtagtgcac
tacgacctgcccaagtcgctggagaactacagccaggaaatcggccgcgccgggcgcgac
ggccagcgctcggaatgcctggtgctggccaaccgcgacagcctcaacgtgctggagaac
ttcgtctacggcgacacacccgagcgtgaaggcatccgcagcgtactggaggacatccgc
caggcgccgaatggccaatgggagaccatgctggtgccgttgtcggaccagtcgaacatc
cgccagctgccactcaagacgctgctggtgcagctggagctacgcggcatcatcgcgcca
cgcttcgcctatttcgccgaatatcgctacaagctgctgatcgattcctccgcgctgctg
agccactttgagggcgagcggcggcagttcgtcgaagccatcctcaccacttcggcccgc
gcgcgaacctgggcgaccctggacttcgacacactctacagccgccatggcgccgagcgc
tcacgggtggtgaaggcgctggattacttccaggagcgcggctgggtggagctggagagc
aagcagatgacggaggtctactcggtgcgcgacgcctccttcgctgtggatcagttgagc
gaggagctgcacggctacttcaagcgccacgaggaaagcgagatcgcccgcatcggcgcc
atgctcgatctgctgggcagctccgaatgcctgagctggcgcctcgcccggtacttcggc
gaccagcaggcgccgcgccagtgtggtcactgttcggtatgcgccggccatgtcgcccgc
ctgccggaaccgcctgcactgccggctctggatggccagtcgctgcacaaccggtgcgac
gccttcctggagaagtaccgcagtgcccgaggcaccgcgcccagcaccgactgcatcacg
cgcttcctctgtggcatcagcgtgccggccttcacccgcatgcgcgcgcgtggattgccg
ggctacgccacgctggaagactacccctacgcccaggtgcgcgactgggtacaggcgcag
ctctga
DBGET
integrated database retrieval system
