Pseudomonas nitroreducens: G5B91_31205
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Entry
G5B91_31205 CDS
T08828
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pnt
Pseudomonas nitroreducens
Pathway
pnt00300
Lysine biosynthesis
pnt00470
D-Amino acid metabolism
pnt01100
Metabolic pathways
pnt01110
Biosynthesis of secondary metabolites
pnt01120
Microbial metabolism in diverse environments
pnt01230
Biosynthesis of amino acids
Module
pnt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G5B91_31205 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
G5B91_31205 (dapF)
Enzymes [BR:
pnt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
G5B91_31205 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QIE90481
UniProt:
A0A6G6J7N0
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All DBs
Position
6569247..6570077
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHVQPRHVKQWGDRNFGVGFDQLLIVEPPSTPDADF
RYRIFNCDGTEVEQCGNGARCFARFVVDKRLTAKKTIRVETKGGMIELTIANDGQVTVDM
GPPRLVPEQVPFKAESEALSYPLEVDGQRYELAAISMGNPHGVLRVDDVDSAPVRTLGPK
LEVHESFPQKANIGFLQIVNPHQARLRVWERGAGETLACGTGACAAAVAGIRQGWLQSPV
QIDLPGGRLSIEWAGPGQPVMMTGPAVRVFEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgcgctttaccaagatgcacgggctgggcaatgacttcatggtcctggacctg
gtcagccagcacgcccatgtgcagccacgccacgtcaaacagtggggcgaccgcaatttc
ggagtcggtttcgatcaactgctgatcgtcgagccgccgagcacaccggacgcggacttc
cgctaccgcatcttcaactgcgacggtaccgaggtcgaacagtgcggcaacggcgcgcgc
tgcttcgcgcgcttcgtggtcgacaagcgcctgaccgcgaagaagaccatccgcgtggaa
accaagggcggcatgatcgagctgaccatcgccaacgatggccaggtcaccgtcgacatg
ggcccgccgcgcctggtgcccgagcaggtgccgttcaaggccgagagcgaggcgctgagc
tatcccctggaagtggacgggcagcgctacgagctggccgccatctccatgggcaacccg
cacggcgtgctgcgcgtggatgacgtcgacagcgcaccggtacgcaccctgggcccgaaa
ctcgaagtccacgaaagcttcccgcagaaggccaacatcggcttcctgcagatcgtcaat
ccgcaccaggcacgcttgcgcgtctgggaacgcggcgccggcgagacactggcctgcggc
accggcgcctgcgccgccgccgtcgccggcattcgccagggctggctgcaatcgccggta
cagatcgaccttcccggcggacggttgtccatcgagtgggcaggaccgggtcagcccgtt
atgatgaccgggcccgccgtgcgggtgttcgaaggccaggtacgtctataa
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