Polynucleobacter asymbioticus: Pnuc_0002
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Entry
Pnuc_0002 CDS
T00502
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
pnu
Polynucleobacter asymbioticus
Pathway
pnu03030
DNA replication
pnu03430
Mismatch repair
pnu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pnuc_0002
03430 Mismatch repair
Pnuc_0002
03440 Homologous recombination
Pnuc_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnu03032
]
Pnuc_0002
03400 DNA repair and recombination proteins [BR:
pnu03400
]
Pnuc_0002
Enzymes [BR:
pnu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pnuc_0002
DNA replication proteins [BR:
pnu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pnuc_0002
DNA repair and recombination proteins [BR:
pnu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pnuc_0002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ABP33224
UniProt:
A4SUR0
LinkDB
All DBs
Position
1724..2839
Genome browser
AA seq
371 aa
AA seq
DB search
MQLVNTSRDSLLKPLQVVSGIVERRHTLPILANLLFKKNGEKVSFISTDIEIQITTNANF
GVGSEDVTTTVAARKLLDILRALPEGEVSLNLKDNRMVVQSGKSRFSLQTLSATEFPVMQ
SVGEVTAAWSMTQKSFRQLISQVHFSMAQQDIRYYLNGMLLVVEGKEVVAVATDGHRLAF
SRVELTEAPSGSGQRQEIIIPRKTILECQHLLEDSDESLEISLTANQVKFSFGDIELISK
LVEGKFPDFQRVIPKGHKNTLVVGRDALQAALQRAAILTTDKFKGVRFSLSPNRITIQST
NAEQEEAQEEIETEYSGDAVEIGFNVSYLLDVLSNLKNEKIQISLGDANSSAVVTLPGSE
NFKYVVMPMRI
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttgttaacacctcgcgcgatagcttattaaaaccactacaggtggtgagtggc
attgttgagcgtagacacacacttcctattttggccaacttattgtttaagaagaatggt
gagaaggtttcttttatctctacggatattgaaattcaaattacaaccaatgcaaatttt
ggcgttggttctgaggatgtcacaactaccgttgctgccagaaaattattagacattttg
cgagcgcttccagaaggtgaagtttctttaaatttaaaagacaaccgtatggttgtgcaa
agcggaaaaagccggttctcacttcaaaccttatccgcaacagagtttccggtaatgcaa
agcgttggtgaggtaactgctgcatggagcatgacgcaaaaaagttttcgtcaattaatt
agccaagttcatttctcaatggctcagcaggatattcgctattacctcaacggtatgttg
ttggtagtggagggtaaagaggttgtagctgttgctaccgacggtcatcgtttagctttt
tcccgggttgagttaaccgaggcaccatctggatcgggccagcggcaggaaattattatt
cctagaaaaacaattttagagtgccaacatttattagaagattctgatgagtctcttgaa
attagcttgactgcaaatcaagtgaagttttcctttggtgacattgagttgatttcaaaa
ctggttgaaggtaagttccctgattttcaacgcgttattccaaagggccacaaaaatacc
ttagtggtaggtcgtgatgcattacaagcagctttgcaacgagccgctatcttgactact
gataaatttaaaggggtgcgcttctccttatcccctaaccgaatcactattcaatctact
aatgctgagcaagaagaagctcaggaagagattgaaactgaatatagcggcgacgcagtt
gagattggttttaatgtcagttatttattggatgttttatcaaacctcaaaaatgaaaaa
attcaaataagtctaggtgacgcaaacagtagtgcggttgtgaccttacctggatcagaa
aattttaagtatgtagtgatgccaatgcgcatttaa
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